MolNFT v1 · #251046 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (P65473)
P65473: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (P65473)”. 4 pockets (best druggability 0.76). MolNFT v1 #251046 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P65473
- Type
- protein
- Length
- 494 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- Udp-N-acetylmuramate--L-alanine ligase
- UniProt
- P65473
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 37% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramate--L-alanine ligase | protein | 494 | 37% helix, 25% strand | P65473 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 926 | 0.76 | 0.79 | 87 | empty |
| 2 | 112 | 0.42 | 0.77 | 18 | empty |
| 3 | 74 | 0.39 | 0.78 | 17 | empty |
| 4 | 55 | 0.32 | 0.77 | 15 | empty |
Compared structures
- 7BVA · Crystal structure of udp-N-acetylmuramic acid L-alanine ligase (murc) from mycobacterium… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 7BVA · Crystal structure of UDP-N-acetylmuramic Acid L-alanine ligase (MurC) from Mycobacterium… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 7BVB · Crystal structure of UDP-N-acetylmuramic Acid L-alanine ligase (MurC) from Mycobacterium… · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 7BVB · Crystal structure of udp-N-acetylmuramic acid L-alanine ligase (murc) from mycobacterium… · an experimental structure of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P65473
- Elsewhere: UniProt P65473 · AlphaFold DB P65473
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