MolNFT v1 · #250946 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (Q8RDQ2)
Q8RDQ2: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (Q8RDQ2)”. 2 pockets (best druggability 0.75). MolNFT v1 #250946 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8RDQ2
- Type
- protein
- Length
- 468 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Udp-N-acetylmuramate--L-alanine ligase
- UniProt
- Q8RDQ2
- Pockets
- 2 · best druggability 0.75
Structure
1 distinct chain · 36% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramate--L-alanine ligase | protein | 468 | 36% helix, 26% strand | Q8RDQ2 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 787 | 0.75 | 0.79 | 84 | empty |
| 2 | 84 | 0.38 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8RDQ2
- Elsewhere: UniProt Q8RDQ2 · AlphaFold DB Q8RDQ2
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