MolNFT v1 · #250882 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (Q1LIM7)
Q1LIM7: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (Q1LIM7)”. 6 pockets (best druggability 0.61). MolNFT v1 #250882 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q1LIM7
- Type
- protein
- Length
- 471 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1613987cbC1744e137dAE77F5F9ad3696140470F
- Molecule
- Udp-N-acetylmuramate--L-alanine ligase
- UniProt
- Q1LIM7
- Pockets
- 6 · best druggability 0.61
Structure
1 distinct chain · 37% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramate--L-alanine ligase | protein | 471 | 37% helix, 27% strand | Q1LIM7 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 200 | 0.61 | 0.82 | 29 | empty |
| 2 | 386 | 0.60 | 0.77 | 43 | empty |
| 3 | 80 | 0.39 | 0.78 | 18 | empty |
| 4 | 84 | 0.36 | 0.76 | 16 | empty |
| 5 | 65 | 0.35 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1LIM7
- Elsewhere: UniProt Q1LIM7 · AlphaFold DB Q1LIM7
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