MolNFT v1 · #250809 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (Q3JND9)
Q3JND9: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (Q3JND9)”. 7 pockets (best druggability 0.63). MolNFT v1 #250809 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q3JND9
- Type
- protein
- Length
- 465 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Udp-N-acetylmuramate--L-alanine ligase
- UniProt
- Q3JND9
- Pockets
- 7 · best druggability 0.63
Structure
1 distinct chain · 37% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramate--L-alanine ligase | protein | 465 | 37% helix, 25% strand | Q3JND9 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 440 | 0.63 | 0.77 | 45 | empty |
| 2 | 197 | 0.61 | 0.83 | 31 | empty |
| 3 | 63 | 0.41 | 0.81 | 15 | empty |
| 4 | 76 | 0.37 | 0.78 | 15 | empty |
| 5 | 72 | 0.33 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3JND9
- Elsewhere: UniProt Q3JND9 · AlphaFold DB Q3JND9
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