MolNFT v1 · #243897 · protein
AlphaFold monomer V2.0 prediction for C-type mannose receptor 2 (Q9UBG0)
Q9UBG0: “AlphaFold monomer V2.0 prediction for C-type mannose receptor 2 (Q9UBG0)”. 18 pockets (best druggability 0.73). MolNFT v1 #243897 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9UBG0
- Type
- protein
- Length
- 1,479 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- C-type mannose receptor 2
- UniProt
- Q9UBG0
- Pockets
- 18 · best druggability 0.73
Structure
1 distinct chain · 18% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | C-type mannose receptor 2 | protein | 1479 | 18% helix, 27% strand | Q9UBG0 |
Pockets
18 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 812 | 0.73 | 0.79 | 78 | empty |
| 2 | 883 | 0.73 | 0.77 | 80 | empty |
| 3 | 615 | 0.73 | 0.80 | 47 | empty |
| 4 | 711 | 0.71 | 0.78 | 72 | empty |
| 5 | 193 | 0.68 | 0.86 | 22 | empty |
Modifications
Observed in the structure: 27 disulfide (disulfide).
Compared structures
- 5EW6 · Structure of ligand binding region of uPARAP at pH 7.4 without calcium · an experimental structure of the same protein · chain A against A, TM-score 0.29
- 5EW6 · Structure of ligand binding region of uparap at pH 7.4 without calcium · an experimental structure of the same protein · chain A against A, TM-score 0.29
- 5AO6 · ENDO180 D1-4, trigonal form · an experimental structure of the same protein · chain A against B, TM-score 0.29
- 5AO6 · Endo180 D1-4, trigonal form · an experimental structure of the same protein · chain A against B, TM-score 0.29
- 5AO5 · Endo180 D1-4, monoclinic form · an experimental structure of the same protein · chain A against A, TM-score 0.29
- 5AO5 · ENDO180 D1-4, monoclinic form · an experimental structure of the same protein · chain A against A, TM-score 0.29
- 5E4L · Structure of ligand binding region of uPARAP at pH 5.3 · an experimental structure of the same protein · chain A against A, TM-score 0.28
- 5E4L · Structure of ligand binding region of uparap at pH 5.3 · an experimental structure of the same protein · chain A against A, TM-score 0.28
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UBG0
- Elsewhere: UniProt Q9UBG0 · AlphaFold DB Q9UBG0
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