MolNFT v1 · #237081 · protein
AlphaFold monomer V2.0 prediction for stromelysin-3 (Q02853)
Q02853: “AlphaFold monomer V2.0 prediction for stromelysin-3 (Q02853)”. 5 pockets (best druggability 0.66). MolNFT v1 #237081 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q02853
- Type
- protein
- Length
- 492 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb195EEeBFFA3E187569b016d1f5e28e644559666
- Molecule
- Stromelysin-3
- UniProt
- Q02853
- Pockets
- 5 · best druggability 0.66
Structure
1 distinct chain · 12% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Stromelysin-3 | protein | 492 | 12% helix, 24% strand | Q02853 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 331 | 0.66 | 0.81 | 39 | empty |
| 2 | 54 | 0.65 | 0.95 | 20 | empty |
| 3 | 104 | 0.44 | 0.79 | 31 | empty |
| 4 | 143 | 0.40 | 0.73 | 20 | empty |
| 5 | 98 | 0.35 | 0.74 | 13 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1HV5 · Crystal structure of the stromelysin-3 (mmp-11) catalytic domain complexed with a… · an experimental structure of the same protein · chain A against E, TM-score 0.31
- 1HV5 · Crystal structure of the stromelysin-3 (mmp-11) catalytic domain complexed with a… · an experimental structure of the same protein · chain A against E, TM-score 0.31
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q02853
- Elsewhere: UniProt Q02853 · AlphaFold DB Q02853
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