MolNFT v1 · #217305 · protein
AlphaFold monomer V2.0 prediction for penicillin-binding protein activator lpoa (Q0T0D4)
Q0T0D4: “AlphaFold monomer V2.0 prediction for penicillin-binding protein activator lpoa (Q0T0D4)”. 10 pockets (best druggability 0.65). MolNFT v1 #217305 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q0T0D4
- Type
- protein
- Length
- 678 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x29f928A539587e32C04DF7AaE14EcA8425395917
- Molecule
- Penicillin-binding protein activator lpoa
- UniProt
- Q0T0D4
- Pockets
- 10 · best druggability 0.65
Structure
1 distinct chain · 45% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Penicillin-binding protein activator lpoa | protein | 678 | 45% helix, 10% strand | Q0T0D4 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 399 | 0.65 | 0.79 | 38 | empty |
| 2 | 489 | 0.61 | 0.75 | 55 | empty |
| 3 | 329 | 0.56 | 0.75 | 36 | empty |
| 4 | 67 | 0.52 | 0.86 | 20 | empty |
| 5 | 142 | 0.47 | 0.78 | 24 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0T0D4
- Elsewhere: UniProt Q0T0D4 · AlphaFold DB Q0T0D4
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