MolNFT v1 · #195142 · protein
AlphaFold monomer V2.0 prediction for 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (Q5SMC8)
Q5SMC8: “AlphaFold monomer V2.0 prediction for 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (Q5SMC8)”. 4 pockets (best druggability 0.78). MolNFT v1 #195142 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5SMC8
- Type
- protein
- Length
- 340 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4b19F45398b689D52b4aF7DC26b26B77cd98f820
- Molecule
- 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
- UniProt
- Q5SMC8
- Pockets
- 4 · best druggability 0.78
Structure
1 distinct chain · 42% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | protein | 340 | 42% helix, 20% strand | Q5SMC8 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 104 | 0.78 | 0.98 | 25 | empty |
| 2 | 76 | 0.34 | 0.76 | 22 | empty |
| 3 | 86 | 0.31 | 0.73 | 18 | empty |
| 4 | 52 | 0.28 | 0.75 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SMC8
- Elsewhere: UniProt Q5SMC8 · AlphaFold DB Q5SMC8
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