MolNFT v1 · #108473 · protein
AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase (A9MM42)
A9MM42: “AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase (A9MM42)”. 5 pockets (best druggability 0.76). MolNFT v1 #108473 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A9MM42
- Type
- protein
- Length
- 620 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB82BBF8d96C5B3247800FA85d8C9E56fE8DbE5c2
- Molecule
- 1-deoxy-D-xylulose-5-phosphate synthase
- UniProt
- A9MM42
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 42% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 1-deoxy-D-xylulose-5-phosphate synthase | protein | 620 | 42% helix, 16% strand | A9MM42 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 619 | 0.76 | 0.82 | 78 | empty |
| 2 | 99 | 0.37 | 0.75 | 18 | empty |
| 3 | 119 | 0.36 | 0.73 | 21 | empty |
| 4 | 53 | 0.36 | 0.79 | 16 | empty |
| 5 | 74 | 0.30 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9MM42
- Elsewhere: UniProt A9MM42 · AlphaFold DB A9MM42
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