MolNFT v1 · #102561 · protein
AlphaFold monomer V2.0 prediction for DNA ligase (Q041K2)
Q041K2: “AlphaFold monomer V2.0 prediction for DNA ligase (Q041K2)”. 7 pockets (best druggability 0.79). MolNFT v1 #102561 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q041K2
- Type
- protein
- Length
- 668 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- DNA ligase
- UniProt
- Q041K2
- Pockets
- 7 · best druggability 0.79
Structure
1 distinct chain · 38% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA ligase | protein | 668 | 38% helix, 21% strand | Q041K2 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 757 | 0.79 | 0.82 | 78 | empty |
| 2 | 548 | 0.78 | 0.84 | 77 | empty |
| 3 | 360 | 0.68 | 0.81 | 34 | empty |
| 4 | 129 | 0.39 | 0.74 | 18 | empty |
| 5 | 146 | 0.37 | 0.72 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q041K2
- Elsewhere: UniProt Q041K2 · AlphaFold DB Q041K2
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