UniProt R8APY9

Ubiquitin-like protein SMT3,N-acetyl-D-glucosamine kinase (R8APY9)

Ubiquitin-like protein SMT3,N-acetyl-D-glucosamine kinase (UniProt R8APY9), EC 2.7.1.59: 4 experimental structures on GenesisL1, 5 ligands bound, 22 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.

UniProt: R8APY9
Protein: Ubiquitin-like protein SMT3,N-acetyl-D-glucosamine kinase
EC: 2.7.1.59
Experimental structures: 4
Predicted models: 0
Ligands: 5
Pockets: 22 · 4 records with a druggable one

Structures

4 records of R8APY9 in the MolNFT archive: 4 experimental, 0 predicted.

Entry	Title	Method	Chains	Ligands	Pockets
7P7I	Native structure of N-acetylglucosamine kinase from Plesiomonas shigelloides	x-ray diffraction	AAA, BBB	ZN, CL	6 (best 0.81)
7P9P	N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine…	x-ray diffraction	AAA, BBB	ZN, ANP, NDG, K	6 (best 0.81)
7P9Y	N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine	x-ray diffraction	AAA, BBB	NDG, ZN, K, CL	5 (best 0.81)
7PA1	Structure of N-acetylglucosamine kinase from Plesiomonas shigelloides in complex with AMP-PNP in…	x-ray diffraction	AAA, BBB	ANP, ZN	5 (best 0.81)

Ligands

ZN · Zinc ion · in 4 records
ANP · Phosphoaminophosphonic acid-adenylate ester · in 2 records
CL · Chloride ion · in 2 records
K · Potassium ion · in 2 records
NDG · 2-acetamido-2-deoxy-alpha-D-glucopyranose · in 2 records

Experiment against prediction

7PA1 chain AAA against the predicted model Q12306: TM-score 0.17, RMSD 3.75 Å
7P9P chain AAA against the predicted model Q12306: TM-score 0.17, RMSD 3.46 Å
7PA1 chain BBB against the predicted model Q12306: TM-score 0.17, RMSD 3.94 Å
7P7I chain BBB against the predicted model Q12306: TM-score 0.17, RMSD 4.04 Å
7P9P chain BBB against the predicted model Q12306: TM-score 0.17, RMSD 4.36 Å
7P9Y chain BBB against the predicted model Q12306: TM-score 0.17, RMSD 3.84 Å
7P7I chain AAA against the predicted model Q12306: TM-score 0.17, RMSD 3.90 Å
7P9Y chain AAA against the predicted model Q12306: TM-score 0.17, RMSD 4.15 Å

Elsewhere

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