UniProt Q9ZHI0
DNA ligase (Q9ZHI0)
DNA ligase (UniProt Q9ZHI0), EC 6.5.1.2: 4 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 17 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9ZHI0
- Protein
- DNA ligase
- EC
- 6.5.1.2
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 17 · 2 records with a druggable one
Structures
5 records of Q9ZHI0 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1DGS | Crystal structure of NAD+-dependent DNA ligase from T. filiformis | x-ray diffraction | A, B | ZN, AMP | 10 (best 0.73) |
| 1DGS | Crystal structure of NAD+-dependent DNA ligase from T. filiformis | x-ray diffraction | A, B | — | — |
| 1V9P | Crystal Structure Of Nad+-Dependent DNA Ligase | x-ray diffraction | A, B | ZN, AMP | 7 (best 0.75) |
| 1V9P | Crystal structure of NAD+-dependent DNA ligase | x-ray diffraction | A, B | — | — |
| Q9ZHI0 | AlphaFold monomer V2.0 prediction for DNA ligase (Q9ZHI0) | predicted | A | — | — |
Ligands
Experiment against prediction
- 1V9P chain B against the predicted model Q9ZHI0: TM-score 0.99, RMSD 0.78 Å
- 1V9P chain B against the predicted model Q9ZHI0: TM-score 0.99, RMSD 0.78 Å
- 1DGS chain B against the predicted model Q9ZHI0: TM-score 0.99, RMSD 0.67 Å
- 1DGS chain B against the predicted model Q9ZHI0: TM-score 0.99, RMSD 0.67 Å
- 1V9P chain A against the predicted model Q9ZHI0: TM-score 0.99, RMSD 0.96 Å
- 1V9P chain A against the predicted model Q9ZHI0: TM-score 0.99, RMSD 0.96 Å
- 1DGS chain A against the predicted model Q9ZHI0: TM-score 0.98, RMSD 0.89 Å
- 1DGS chain A against the predicted model Q9ZHI0: TM-score 0.98, RMSD 0.89 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.