UniProt Q9Y7M4
Probable U6 snRNA-associated Sm-like protein LSm3 (Q9Y7M4)
Probable U6 snRNA-associated Sm-like protein LSm3 (UniProt Q9Y7M4): 10 experimental structures and 1 predicted model on GenesisL1, 28 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9Y7M4
- Protein
- Probable U6 snRNA-associated Sm-like protein LSm3
- Experimental structures
- 10
- Predicted models
- 1
- Pockets
- 28 · 5 records with a druggable one
Structures
11 records of Q9Y7M4 in the MolNFT archive: 10 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4EMG | Crystal structure of SpLsm3 | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N | — | 12 (best 0.77) |
| 4EMG | Crystal structure of SPLSM3 | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N | — | — |
| 6PPN | Structure of S. pombe Lsm2-8 with unprocessed U6 snRNA | x-ray diffraction | C, K | — | 5 (best 0.63) |
| 6PPN | Structure of S. pombe LSM2-8 with unprocessed U6 snrna | x-ray diffraction | C, K | — | — |
| 6PPP | Structure of S. pombe Lsm2-8 with processed U6 snRNA | x-ray diffraction | C, K | — | 7 (best 0.64) |
| 6PPP | Structure of S. pombe LSM2-8 with processed U6 snrna | x-ray diffraction | C, K | — | — |
| 6PPQ | Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' adenosine | x-ray diffraction | C | — | 2 (best 0.71) |
| 6PPQ | Structure of S. pombe LSM1-7 with RNA, polyuridine with 3' adenosine | x-ray diffraction | C | — | — |
| 6PPV | Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' guanosine | x-ray diffraction | C | — | 2 (best 0.72) |
| 6PPV | Structure of S. pombe LSM1-7 with RNA, polyuridine with 3' guanosine | x-ray diffraction | C | — | — |
| Q9Y7M4 | AlphaFold monomer V2.0 prediction for probable U6 snrna-associated sm-like protein LSM3 (Q9Y7M4) | predicted | A | — | — |
Experiment against prediction
- 6PPV chain C against the predicted model Q9Y7M4: TM-score 0.98, RMSD 0.48 Å
- 6PPV chain C against the predicted model Q9Y7M4: TM-score 0.98, RMSD 0.48 Å
- 6PPQ chain C against the predicted model Q9Y7M4: TM-score 0.98, RMSD 0.49 Å
- 6PPQ chain C against the predicted model Q9Y7M4: TM-score 0.98, RMSD 0.49 Å
- 4EMG chain A against the predicted model Q9Y7M4: TM-score 0.97, RMSD 0.58 Å
- 4EMG chain A against the predicted model Q9Y7M4: TM-score 0.97, RMSD 0.58 Å
- 6PPN chain K against the predicted model Q9Y7M4: TM-score 0.95, RMSD 1.23 Å
- 6PPP chain C against the predicted model Q9Y7M4: TM-score 0.95, RMSD 1.21 Å
- 6PPP chain C against the predicted model Q9Y7M4: TM-score 0.95, RMSD 1.21 Å
- 6PPN chain C against the predicted model Q9Y7M4: TM-score 0.94, RMSD 1.27 Å
Elsewhere
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