UniProt Q9Y4Y9
U6 snRNA-associated Sm-like protein LSm5 (Q9Y4Y9)
U6 snRNA-associated Sm-like protein LSm5 (UniProt Q9Y4Y9): 22 experimental structures and 1 predicted model on GenesisL1. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9Y4Y9
- Protein
- U6 snRNA-associated Sm-like protein LSm5
- Experimental structures
- 22
- Predicted models
- 1
Structures
23 records of Q9Y4Y9 in the MolNFT archive: 22 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3JCR | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | electron microscopy | 5 | — | — |
| 3JCR | 3D structure determination of the HUMAN*U4/U6.U5* tri-snrnp complex | electron microscopy | 5 | — | — |
| 5O9Z | Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex) | electron microscopy | r | — | — |
| 5O9Z | Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex) | electron microscopy | r | — | — |
| 6AH0 | The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex) | electron microscopy | t | — | — |
| 6AH0 | The cryo-EM structure of the precusor of human pre-catalytic spliceosome (pre-B complex) | electron microscopy | t | — | — |
| 6AHD | The Cryo-EM Structure of Human Pre-catalytic Spliceosome (B complex) at 3.8 angstrom resolution | electron microscopy | t | — | — |
| 6QW6 | Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution. | electron microscopy | 65 | — | — |
| 6QX9 | Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). | electron microscopy | 65 | — | — |
| 7ABG | Human pre-Bact-1 spliceosome | electron microscopy | H | — | — |
| 8H6E | Cryo-EM structure of human exon-defined spliceosome in the late pre-B state. | electron microscopy | 6d | — | — |
| 8H6J | Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state. | electron microscopy | 6d | — | — |
| 8H6K | Cryo-EM structure of human exon-defined spliceosome in the mature B state. | electron microscopy | 6d | — | — |
| 8H6L | Cryo-EM structure of human exon-defined spliceosome in the early B state. | electron microscopy | 6d | — | — |
| 8QO9 | Cryo-EM structure of a human spliceosomal B complex protomer | electron microscopy | 65 | — | — |
| 8QXD | Cryo-EM structure of the cross-exon pre-B complex | electron microscopy | 65 | — | — |
| 8QZS | Cryo-EM structure of the cross-exon B-like complex | electron microscopy | 65 | — | — |
| 8R08 | Cryo-EM structure of the cross-exon pre-B+AMPPNP complex | electron microscopy | 65 | — | — |
| 8R09 | Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex | electron microscopy | 65 | — | — |
| 8R0A | Cryo-EM structure of the cross-exon pre-B+5'ss complex | electron microscopy | 65 | — | — |
| 8R0B | Cryo-EM structure of the cross-exon pre-B+ATP complex | electron microscopy | 65 | — | — |
| 8RM5 | Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPyS complex | electron microscopy | 65 | — | — |
| Q9Y4Y9 | AlphaFold monomer V2.0 prediction for U6 snrna-associated sm-like protein LSM5 (Q9Y4Y9) | predicted | A | — | — |
Experiment against prediction
- 8H6E chain 6d against the predicted model Q9Y4Y9: TM-score 0.90, RMSD 1.18 Å
- 8H6J chain 6d against the predicted model Q9Y4Y9: TM-score 0.90, RMSD 1.18 Å
- 8H6K chain 6d against the predicted model Q9Y4Y9: TM-score 0.90, RMSD 1.18 Å
- 8H6L chain 6d against the predicted model Q9Y4Y9: TM-score 0.90, RMSD 1.18 Å
- 6AHD chain t against the predicted model Q9Y4Y9: TM-score 0.90, RMSD 1.18 Å
- 8QO9 chain 65 against the predicted model Q9Y4Y9: TM-score 0.90, RMSD 1.23 Å
- 8QZS chain 65 against the predicted model Q9Y4Y9: TM-score 0.89, RMSD 1.27 Å
- 6AH0 chain t against the predicted model Q9Y4Y9: TM-score 0.89, RMSD 1.58 Å
- 6AH0 chain t against the predicted model Q9Y4Y9: TM-score 0.89, RMSD 1.58 Å
- 6QW6 chain 65 against the predicted model Q9Y4Y9: TM-score 0.88, RMSD 1.38 Å
Elsewhere
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