UniProt Q9Y4P1
Cysteine protease APG4B (Q9Y4P1)
Cysteine protease APG4B (UniProt Q9Y4P1), EC 3.4.22.-: 14 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9Y4P1
- Protein
- Cysteine protease APG4B
- EC
- 3.4.22.-
- Experimental structures
- 14
- Predicted models
- 1
- Ligands
- 2
Structures
15 records of Q9Y4P1 in the MolNFT archive: 14 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2CY7 | The crystal structure of human Atg4B | x-ray diffraction | A | — | — |
| 2CY7 | The crystal structure of human ATG4B | x-ray diffraction | A | — | — |
| 2D1I | Structure of human Atg4b | x-ray diffraction | A, B | — | — |
| 2D1I | Structure of human ATG4B | x-ray diffraction | A, B | — | — |
| 2Z0D | The crystal structure of human Atg4B- LC3(1-120) complex | x-ray diffraction | A | — | — |
| 2Z0D | The crystal structure of human ATG4B- LC3(1-120) complex | x-ray diffraction | A | — | — |
| 2Z0E | The crystal structure of human Atg4B- LC3(1-124) complex | x-ray diffraction | A | — | — |
| 2Z0E | The crystal structure of human ATG4B- LC3(1-124) complex | x-ray diffraction | A | — | — |
| 2ZZP | The crystal structure of human Atg4B(C74S)- LC3(1-124) complex | x-ray diffraction | A | — | — |
| 2ZZP | The crystal structure of human ATG4B(C74S)- LC3(1-124) complex | x-ray diffraction | A | — | — |
| 5LXH | GABARAP-L1 ATG4B LIR Complex | x-ray diffraction | E, F, G | SO4 | — |
| 5LXH | Gabarap-L1 ATG4B lir complex | x-ray diffraction | E, F, G | SO4 | — |
| 5LXI | GABARAP-L1 ATG4B LIR Complex | x-ray diffraction | C, E | PER | — |
| 5LXI | Gabarap-L1 ATG4B lir complex | x-ray diffraction | C, E | PER | — |
| Q9Y4P1 | AlphaFold monomer V2.0 prediction for cysteine protease ATG4B (Q9Y4P1) | predicted | A | — | — |
Ligands
Experiment against prediction
- 2CY7 chain A against the predicted model Q9Y4P1: TM-score 1.00, RMSD 0.37 Å
- 2CY7 chain A against the predicted model Q9Y4P1: TM-score 1.00, RMSD 0.37 Å
- 2D1I chain A against the predicted model Q9Y4P1: TM-score 0.99, RMSD 0.89 Å
- 2D1I chain A against the predicted model Q9Y4P1: TM-score 0.99, RMSD 0.89 Å
- 2D1I chain B against the predicted model Q9Y4P1: TM-score 0.99, RMSD 0.89 Å
- 2D1I chain B against the predicted model Q9Y4P1: TM-score 0.99, RMSD 0.89 Å
- 2ZZP chain A against the predicted model Q9Y4P1: TM-score 0.95, RMSD 1.10 Å
- 2ZZP chain A against the predicted model Q9Y4P1: TM-score 0.95, RMSD 1.10 Å
- 2Z0D chain A against the predicted model Q9Y4P1: TM-score 0.95, RMSD 1.10 Å
- 2Z0D chain A against the predicted model Q9Y4P1: TM-score 0.95, RMSD 1.10 Å
Elsewhere
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