UniProt Q9UBU7
Protein DBF4 homolog A (Q9UBU7)
Protein DBF4 homolog A (UniProt Q9UBU7): 13 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 6 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9UBU7
- Protein
- Protein DBF4 homolog A
- Experimental structures
- 13
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 6 · 1 record with a druggable one
Structures
14 records of Q9UBU7 in the MolNFT archive: 13 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4F99 | Human CDC7 kinase in complex with DBF4 and nucleotide | x-ray diffraction | B | — | — |
| 4F99 | Human CDC7 kinase in complex with DBF4 and nucleotide | x-ray diffraction | B | — | — |
| 4F9A | Human CDC7 kinase in complex with DBF4 and nucleotide | x-ray diffraction | B, D | — | — |
| 4F9A | Human CDC7 kinase in complex with DBF4 and nucleotide | x-ray diffraction | B, D | — | — |
| 4F9B | Human CDC7 kinase in complex with DBF4 and PHA767491 | x-ray diffraction | B, D | — | — |
| 4F9B | Human CDC7 kinase in complex with DBF4 and PHA767491 | x-ray diffraction | B, D | — | — |
| 4F9C | Human CDC7 kinase in complex with DBF4 and XL413 | x-ray diffraction | B | — | — |
| 4F9C | Human CDC7 kinase in complex with DBF4 and XL413 | x-ray diffraction | B | — | — |
| 6YA6 | Minimal construct of Cdc7-Dbf4 bound to XL413 | x-ray diffraction | B | ZN, CL | 3 (best 0.50) |
| 6YA6 | Minimal construct of CDC7-DBF4 bound to XL413 | x-ray diffraction | B | ZN, CL | — |
| 6YA7 | Cdc7-Dbf4 bound to an Mcm2-S40 derived bivalent substrate | x-ray diffraction | B | ZN | 3 (best 0.63) |
| 6YA7 | CDC7-DBF4 bound to an MCM2-S40 derived bivalent substrate | x-ray diffraction | B | ZN | — |
| 6YA8 | CDC7-DBF4 bound to ADP-BEF3 | x-ray diffraction | B | ZN | — |
| Q9UBU7 | AlphaFold monomer V2.0 prediction for protein DBF4 homolog a (Q9UBU7) | predicted | A | — | — |
Ligands
Experiment against prediction
- 4F9C chain B against the predicted model Q9UBU7: TM-score 0.97, RMSD 0.65 Å
- 4F9C chain B against the predicted model Q9UBU7: TM-score 0.97, RMSD 0.65 Å
- 6YA7 chain B against the predicted model Q9UBU7: TM-score 0.96, RMSD 1.17 Å
- 6YA7 chain B against the predicted model Q9UBU7: TM-score 0.96, RMSD 1.17 Å
- 4F9B chain D against the predicted model Q9UBU7: TM-score 0.96, RMSD 0.81 Å
- 4F9B chain D against the predicted model Q9UBU7: TM-score 0.96, RMSD 0.81 Å
- 6YA6 chain B against the predicted model Q9UBU7: TM-score 0.96, RMSD 1.22 Å
- 6YA6 chain B against the predicted model Q9UBU7: TM-score 0.96, RMSD 1.22 Å
- 4F9B chain B against the predicted model Q9UBU7: TM-score 0.95, RMSD 0.82 Å
- 4F9B chain B against the predicted model Q9UBU7: TM-score 0.95, RMSD 0.82 Å
Elsewhere
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