UniProt Q9NY43
BarH-like 2 homeobox protein (Q9NY43)
BarH-like 2 homeobox protein (UniProt Q9NY43): 11 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 67 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9NY43
- Protein
- BarH-like 2 homeobox protein
- Experimental structures
- 11
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 67 · 9 records with a druggable one
Structures
12 records of Q9NY43 in the MolNFT archive: 11 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 8PM5 | transcription factor BARHL2 bound to TAAAT DNA sequence | x-ray diffraction | A, D, G, J, M, N | — | 10 (best 0.66) |
| 8PM7 | transcription factor BARHL2 bound to TAATC DNA sequence | x-ray diffraction | A, C, E, G | — | 6 (best 0.77) |
| 8PMC | transcription factor BARHL2 bound to TAATT DNA sequence | x-ray diffraction | A, C, E, G | — | 6 (best 0.74) |
| 8PMF | transcription factor BARHL2 bound to DNA sequences | x-ray diffraction | A | — | 3 (best 0.50) |
| 8PMN | transcription factor BARHL2 bound to DNA sequences | x-ray diffraction | A | — | 3 (best 0.52) |
| 8PMV | transcription factor BARHL2 bound to TAAGC DNA sequence | x-ray diffraction | A, D, G, J | — | 7 (best 0.70) |
| 8PN4 | transcription factor BARHL2 bound to DNA sequences | x-ray diffraction | A, D, G, J, M | — | 11 (best 0.70) |
| 8PNA | transcription factor BARHL2 bound to TAATG DNA sequence | x-ray diffraction | A | — | 2 (best 0.50) |
| 8PNC | Transcription factor BARHL2 bound to TAAGT DNA sequence | x-ray diffraction | A, E, H, K | — | 8 (best 0.76) |
| 8R7F | Transcription factor BARHL2 homodimer with spacing two bp | x-ray diffraction | A, E | — | 4 (best 0.48) |
| 8R7Z | transcription factor BARHL2 homodimer with spacing four bp | x-ray diffraction | E, A, G, K | NA | 7 (best 0.64) |
| Q9NY43 | AlphaFold monomer V2.0 prediction for barh-like 2 homeobox protein (Q9NY43) | predicted | A | — | — |
Ligands
- NA · Sodium ion · in 1 record
Experiment against prediction
- 8R7Z chain K against the predicted model Q9NY43: TM-score 0.98, RMSD 0.28 Å
- 8PM5 chain M against the predicted model Q9NY43: TM-score 0.98, RMSD 0.35 Å
- 8PN4 chain M against the predicted model Q9NY43: TM-score 0.93, RMSD 0.72 Å
- 8PM5 chain J against the predicted model Q9NY43: TM-score 0.93, RMSD 1.32 Å
- 8PN4 chain G against the predicted model Q9NY43: TM-score 0.93, RMSD 1.18 Å
- 8PM5 chain A against the predicted model Q9NY43: TM-score 0.91, RMSD 1.45 Å
- 8PNC chain E against the predicted model Q9NY43: TM-score 0.91, RMSD 1.40 Å
- 8PNC chain A against the predicted model Q9NY43: TM-score 0.91, RMSD 1.44 Å
- 8PM7 chain G against the predicted model Q9NY43: TM-score 0.91, RMSD 1.49 Å
- 8PMC chain G against the predicted model Q9NY43: TM-score 0.91, RMSD 1.52 Å
Elsewhere
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