UniProt Q9LCT6
D-alanine--D-alanine ligase B (Q9LCT6)
D-alanine--D-alanine ligase B (UniProt Q9LCT6), EC 6.3.2.4: 2 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 17 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q9LCT6
- Protein
- D-alanine--D-alanine ligase B
- EC
- 6.3.2.4
- Experimental structures
- 2
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 17 · 2 records with a druggable one
Structures
3 records of Q9LCT6 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 8EVY | DdlB from Pseudomonas aeruginosa PAO1 in complex with ATP and D-ala-D-ala | x-ray diffraction | B, A, C | MG, ATP, NA | 8 (best 0.73) |
| 8EVZ | DdlB from Pseudomonas aeruginosa PAO1 in complex with ADP and phosphorylated D-cycloserine | x-ray diffraction | A, B, C | MG, ADP, DS0 | 9 (best 0.78) |
| Q9LCT6 | AlphaFold monomer V2.0 prediction for D-alanine--D-alanine ligase B (Q9LCT6) | predicted | A | — | — |
Ligands
Experiment against prediction
- 8EVZ chain A against the predicted model Q9LCT6: TM-score 0.97, RMSD 1.22 Å
- 8EVZ chain B against the predicted model Q9LCT6: TM-score 0.96, RMSD 1.25 Å
- 8EVZ chain C against the predicted model Q9LCT6: TM-score 0.96, RMSD 1.38 Å
- 8EVY chain C against the predicted model Q9LCT6: TM-score 0.95, RMSD 1.41 Å
- 8EVY chain A against the predicted model Q9LCT6: TM-score 0.95, RMSD 1.42 Å
- 8EVY chain B against the predicted model Q9LCT6: TM-score 0.95, RMSD 1.55 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.