UniProt Q9KR64
Sialic acid-binding periplasmic protein SiaP (Q9KR64)
Sialic acid-binding periplasmic protein SiaP (UniProt Q9KR64): 5 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 36 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q9KR64
- Protein
- Sialic acid-binding periplasmic protein SiaP
- Experimental structures
- 5
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 36 · 5 records with a druggable one
Structures
6 records of Q9KR64 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7A5C | Crystal structure of spin labelled VcSiaP R125A bound to an artificial peptide ligand. | x-ray diffraction | A, B | — | 5 (best 0.84) |
| 7A5C | Crystal structure of spin labelled vcsiap R125A bound to an artificial peptide ligand. | x-ray diffraction | A, B | — | — |
| 9FVB | Crystal structure of VcSiaP in complex with a VHH antibody (VHH_VcP#2) | x-ray diffraction | A, B | — | 4 (best 0.63) |
| 9FVC | Crystal structure of VcSiaP in complex with a VHH antibody (VHH_VcP#1) | x-ray diffraction | A, B | — | 5 (best 0.62) |
| 9FVE | Crystal structure of VcSiaP W73A mutant in complex with sialic acid and a VHH antibody (VHH_VcP#2) | x-ray diffraction | A, C, E, G, I, K, M, O, Q, U, W, Y | SLB | 20 (best 0.84) |
| Q9KR64 | AlphaFold monomer V2.0 prediction for sialic acid-binding periplasmic protein siap (Q9KR64) | predicted | A | — | 2 (best 0.67) |
Ligands
- SLB · N-acetyl-beta-neuraminic acid · in 1 record
Experiment against prediction
- 9FVB chain B against the predicted model Q9KR64: TM-score 0.98, RMSD 0.84 Å
- 9FVC chain A against the predicted model Q9KR64: TM-score 0.98, RMSD 0.90 Å
- 9FVB chain A against the predicted model Q9KR64: TM-score 0.98, RMSD 1.04 Å
- 7A5C chain A against the predicted model Q9KR64: TM-score 0.95, RMSD 0.77 Å
- 7A5C chain A against the predicted model Q9KR64: TM-score 0.95, RMSD 0.77 Å
- 9FVE chain A against the predicted model Q9KR64: TM-score 0.89, RMSD 2.32 Å
- 9FVE chain E against the predicted model Q9KR64: TM-score 0.89, RMSD 2.39 Å
Elsewhere
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