UniProt Q9HXE3
FAD-dependent catabolic D-arginine dehydrogenase DauA (Q9HXE3)
FAD-dependent catabolic D-arginine dehydrogenase DauA (UniProt Q9HXE3), EC 1.4.99.6: 14 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 9 pockets. Binding sites, druggability and experiment against…
- UniProt
- Q9HXE3
- Protein
- FAD-dependent catabolic D-arginine dehydrogenase DauA
- EC
- 1.4.99.6
- Experimental structures
- 14
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 9 · 3 records with a druggable one
Structures
15 records of Q9HXE3 in the MolNFT archive: 14 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3NYC | Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase | x-ray diffraction | A | — | — |
| 3NYC | Crystal structure of pseudomonas aeruginosa D-arginine dehydrogenase | x-ray diffraction | A | — | — |
| 3NYE | Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with Imino-Arginine | x-ray diffraction | A | — | — |
| 3NYE | Crystal structure of pseudomonas aeruginosa D-arginine dehydrogenase in complex with imino-arginine | x-ray diffraction | A | — | — |
| 3NYF | Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with Imino-Histidine | x-ray diffraction | A | — | — |
| 3NYF | Crystal structure of pseudomonas aeruginosa D-arginine dehydrogenase in complex with imino-histidine | x-ray diffraction | A | — | — |
| 3SM8 | Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with an (N5) Flavin… | x-ray diffraction | A | — | — |
| 3SM8 | Crystal structure of pseudomonas aeruginosa D-arginine dehydrogenase in complex with an (N5) flavin… | x-ray diffraction | A | — | — |
| 6P9D | Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase Y249F variant with FAD… | x-ray diffraction | A | FDA | 3 (best 0.84) |
| 6P9D | Crystal structure of pseudomonas aeruginosa D-arginine dehydrogenase Y249F variant with FAD… | x-ray diffraction | A | FDA | — |
| 6PLD | Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase Y249F variant with 6-OH-FAD… | x-ray diffraction | A | 6FA | 3 (best 0.84) |
| 6PLD | Crystal structure of pseudomonas aeruginosa D-arginine dehydrogenase Y249F variant with 6-oh-FAD… | x-ray diffraction | A | 6FA | — |
| 7RDF | Crystal structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase Y249F co-crystallized in the… | x-ray diffraction | A | 4R2, 6FA | 3 (best 0.83) |
| 7RDF | Crystal structure of pseudomonas aeruginosa D-arginine dehydrogenase Y249F co-crystallized in the… | x-ray diffraction | A | 4R2, 6FA | — |
| Q9HXE3 | AlphaFold monomer V2.0 prediction for FAD-dependent catabolic D-arginine dehydrogenase daua (Q9HXE3) | predicted | A | — | — |
Ligands
- 6FA · 6-hydroxy-flavin-adenine dinucleotide · in 4 records
- 4R2 · [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{S})-5-[5-[(~{E})-4-carbamimidamidobut-2-enoyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-yl]-2,3, 4-tris(oxidanyl)pentyl] hydrogen phosphate · in 2 records
- FDA · Dihydroflavine-adenine dinucleotide · in 2 records
Experiment against prediction
- 7RDF chain A against the predicted model Q9HXE3: TM-score 1.00, RMSD 0.32 Å
- 7RDF chain A against the predicted model Q9HXE3: TM-score 1.00, RMSD 0.32 Å
- 6PLD chain A against the predicted model Q9HXE3: TM-score 1.00, RMSD 0.33 Å
- 6PLD chain A against the predicted model Q9HXE3: TM-score 1.00, RMSD 0.33 Å
- 3NYE chain A against the predicted model Q9HXE3: TM-score 0.98, RMSD 0.35 Å
- 3NYE chain A against the predicted model Q9HXE3: TM-score 0.98, RMSD 0.35 Å
- 6P9D chain A against the predicted model Q9HXE3: TM-score 1.00, RMSD 0.34 Å
- 6P9D chain A against the predicted model Q9HXE3: TM-score 1.00, RMSD 0.34 Å
- 3NYF chain A against the predicted model Q9HXE3: TM-score 0.98, RMSD 0.37 Å
- 3NYF chain A against the predicted model Q9HXE3: TM-score 0.98, RMSD 0.37 Å
Elsewhere
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