UniProt Q9DAG9
PHD finger protein 7 (Q9DAG9)
PHD finger protein 7 (UniProt Q9DAG9), EC 2.3.2.23, 2.3.2.24: 5 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 28 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q9DAG9
- Protein
- PHD finger protein 7
- EC
- 2.3.2.23, 2.3.2.24
- Experimental structures
- 5
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 28 · 4 records with a druggable one
Structures
6 records of Q9DAG9 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1WEQ | Solution structure of PHD domain in PHD finger protein 7 | solution nmr | A | ZN | — |
| 1WEQ | Solution structure of phd domain in phd finger protein 7 | solution nmr | A | — | — |
| 8JWJ | PHD Finger Protein 7 (PHF7) in complex with UBE2D2 | x-ray diffraction | A, C | ZN, SO4 | 7 (best 0.64) |
| 8JWS | ePHD domain of PHD Finger Protein 7 (PHF7) | x-ray diffraction | A, B, C | ZN | 6 (best 0.83) |
| 8JWU | PHD Finger Protein 7 (PHF7) fused to UBE2D2 via a (GSGG)3 linker | x-ray diffraction | A, B, C | ZN | 13 (best 0.77) |
| Q9DAG9 | AlphaFold monomer V2.0 prediction for phd finger protein 7 (Q9DAG9) | predicted | A | — | 2 (best 0.62) |
Ligands
Experiment against prediction
- 8JWS chain A against the predicted model Q9DAG9: TM-score 0.98, RMSD 0.66 Å
- 8JWU chain B against the predicted model P62837: TM-score 0.36, RMSD 0.73 Å
- 8JWU chain A against the predicted model P62837: TM-score 0.36, RMSD 0.82 Å
- 8JWU chain C against the predicted model P62837: TM-score 0.35, RMSD 0.84 Å
- 8JWJ chain C against the predicted model Q9DAG9: TM-score 0.78, RMSD 2.80 Å
- 8JWJ chain A against the predicted model Q9DAG9: TM-score 0.78, RMSD 2.19 Å
- 8JWU chain C against the predicted model Q9DAG9: TM-score 0.54, RMSD 3.17 Å
- 8JWU chain A against the predicted model Q9DAG9: TM-score 0.54, RMSD 3.18 Å
- 8JWU chain B against the predicted model Q9DAG9: TM-score 0.53, RMSD 3.13 Å
- 1WEQ chain A against the predicted model Q9DAG9: TM-score 0.61, RMSD 2.29 Å
Elsewhere
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