UniProt Q9D125
28S ribosomal protein S25, mitochondrial (Q9D125)
28S ribosomal protein S25, mitochondrial (UniProt Q9D125): 4 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 10 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9D125
- Protein
- 28S ribosomal protein S25, mitochondrial
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 10 · 4 records with a druggable one
Structures
5 records of Q9D125 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7PNT | Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with… | electron microscopy | T | FES | 5 (best 0.84) |
| 7PNU | Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with… | electron microscopy | T | FES | 2 (best 0.88) |
| 7PNV | Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with… | electron microscopy | T | FES | 1 (best 0.87) |
| 7PNW | Mouse mitochondrial ribosome small subunit lacking m5U modification | electron microscopy | T | FES | 2 (best 0.84) |
| Q9D125 | AlphaFold monomer V2.0 prediction for 28S ribosomal protein S25, mitochondrial (Q9D125) | predicted | A | — | — |
Ligands
- FES · Fe2/s2 (inorganic) cluster · in 4 records
Experiment against prediction
- 7PNT chain T against the predicted model Q9D125: TM-score 0.96, RMSD 1.00 Å
- 7PNW chain T against the predicted model Q9D125: TM-score 0.96, RMSD 1.04 Å
- 7PNU chain T against the predicted model Q9D125: TM-score 0.96, RMSD 1.06 Å
- 7PNV chain T against the predicted model Q9D125: TM-score 0.96, RMSD 1.07 Å
Elsewhere
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