UniProt Q9BZV1
UBX domain-containing protein 6 (Q9BZV1)
UBX domain-containing protein 6 (UniProt Q9BZV1): 10 experimental structures and 1 predicted model on GenesisL1, 27 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9BZV1
- Protein
- UBX domain-containing protein 6
- Experimental structures
- 10
- Predicted models
- 1
- Pockets
- 27 · 7 records with a druggable one
Structures
11 records of Q9BZV1 in the MolNFT archive: 10 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6SAP | Structure of the PUB domain from Ubiquitin Regulatory X domain protein 1 (UBXD1) | solution nmr | A | — | 1 (best 0.50) |
| 6SAP | Structure of the pub domain from ubiquitin regulatory X domain protein 1 (UBXD1) | solution nmr | A | — | — |
| 8FCL | Cryo-EM structure of p97:UBXD1 closed state | electron microscopy | G | — | 2 (best 0.84) |
| 8FCM | Cryo-EM structure of p97:UBXD1 open state | electron microscopy | G | — | 1 (best 0.76) |
| 8FCN | Cryo-EM structure of p97:UBXD1 VIM-only state | electron microscopy | L, K, J, I, H, G | — | 5 (best 0.80) |
| 8FCO | Cryo-EM structure of p97:UBXD1 meta state | electron microscopy | H, G | — | 7 (best 0.84) |
| 8FCP | Cryo-EM structure of p97:UBXD1 para state | electron microscopy | H, G | — | — |
| 8FCQ | Cryo-EM structure of p97:UBXD1 PUB-in state | electron microscopy | G | — | 4 (best 0.81) |
| 8FCR | Cryo-EM structure of p97:UBXD1 H4-bound state | electron microscopy | G | — | 4 (best 0.79) |
| 8FCT | Cryo-EM structure of p97:UBXD1 lariat mutant | electron microscopy | G | — | 1 (best 0.77) |
| Q9BZV1 | AlphaFold monomer V2.0 prediction for ubx domain-containing protein 6 (Q9BZV1) | predicted | A | — | 2 (best 0.35) |
Experiment against prediction
- 6SAP chain A against the predicted model Q9BZV1: TM-score 0.85, RMSD 2.07 Å
- 6SAP chain A against the predicted model Q9BZV1: TM-score 0.85, RMSD 2.07 Å
- 8FCO chain H against the predicted model Q9BZV1: TM-score 0.82, RMSD 2.95 Å
- 8FCL chain G against the predicted model Q9BZV1: TM-score 0.80, RMSD 3.24 Å
- 8FCP chain H against the predicted model Q9BZV1: TM-score 0.80, RMSD 3.23 Å
- 8FCM chain G against the predicted model Q9BZV1: TM-score 0.75, RMSD 3.82 Å
- 8FCR chain G against the predicted model Q9BZV1: TM-score 0.75, RMSD 3.38 Å
- 8FCN chain L against the predicted model Q9BZV1: TM-score 0.68, RMSD 0.36 Å
- 8FCQ chain G against the predicted model Q9BZV1: TM-score 0.64, RMSD 5.00 Å
- 8FCT chain G against the predicted model Q9BZV1: TM-score 0.47, RMSD 2.74 Å
Elsewhere
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