UniProt Q9BVK6
Transmembrane emp24 domain-containing protein 9 (Q9BVK6)
Transmembrane emp24 domain-containing protein 9 (UniProt Q9BVK6): 2 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 35 pockets. Binding sites, druggability and experiment against prediction (TM-score)…
- UniProt
- Q9BVK6
- Protein
- Transmembrane emp24 domain-containing protein 9
- Experimental structures
- 2
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 35 · 2 records with a druggable one
Structures
3 records of Q9BVK6 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 9CJK | Human TMED9 octamer structure | electron microscopy | D, F, H, E, A, C, G, B | 9ED | 16 (best 0.83) |
| 9CJL | Molecular basis of TMED9 dodecamer | electron microscopy | A, B, C, D, E, F, G, H, I, J, K, L | 9ED | 18 (best 0.84) |
| Q9BVK6 | AlphaFold monomer V2.0 prediction for transmembrane EMP24 domain- containing protein 9 (Q9BVK6) | predicted | A | — | 1 (best 0.44) |
Ligands
- 9ED · [(2R)-2-[(E)-octadec-9-enoyl]oxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] (E)-octadec-9-enoate · in 2 records
Experiment against prediction
- 9CJL chain F against the predicted model Q9BVK6: TM-score 0.85, RMSD 1.55 Å
- 9CJK chain H against the predicted model Q9BVK6: TM-score 0.85, RMSD 1.13 Å
- 9CJL chain I against the predicted model Q9BVK6: TM-score 0.84, RMSD 1.61 Å
- 9CJL chain E against the predicted model Q9BVK6: TM-score 0.84, RMSD 1.95 Å
- 9CJL chain H against the predicted model Q9BVK6: TM-score 0.83, RMSD 1.75 Å
- 9CJK chain E against the predicted model Q9BVK6: TM-score 0.83, RMSD 1.32 Å
- 9CJK chain C against the predicted model Q9BVK6: TM-score 0.83, RMSD 1.81 Å
- 9CJL chain J against the predicted model Q9BVK6: TM-score 0.82, RMSD 1.51 Å
- 9CJK chain B against the predicted model Q9BVK6: TM-score 0.82, RMSD 1.34 Å
- 9CJK chain G against the predicted model Q9BVK6: TM-score 0.82, RMSD 1.19 Å
Elsewhere
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