UniProt Q988B9
4-pyridoxolactonase (Q988B9)
4-pyridoxolactonase (UniProt Q988B9), EC 3.1.1.27: 6 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 4 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q988B9
- Protein
- 4-pyridoxolactonase
- EC
- 3.1.1.27
- Experimental structures
- 6
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 4 · 4 records with a druggable one
Structures
7 records of Q988B9 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3AJ3 | Crystal structure of selenomethionine substituted 4-pyridoxolactonase from Mesorhizobium loti | x-ray diffraction | A | ZN, PO4 | 1 (best 0.61) |
| 3AJ3 | Crystal structure of selenomethionine substituted 4-pyridoxolactonase from mesorhizobium loti | x-ray diffraction | A | ZN, PO4 | 1 (best 0.61) |
| 4KEP | Crystal structure of 4-pyridoxolactonase, wild-type | x-ray diffraction | A | ZN, CL | 1 (best 0.59) |
| 4KEP | Crystal structure of 4-pyridoxolactonase, wild-type | x-ray diffraction | A | — | — |
| 4KEQ | Crystal structure of 4-pyridoxolactonase, 5-pyridoxolactone bound | x-ray diffraction | A | ZN, 5PN | 1 (best 0.61) |
| 4KEQ | Crystal structure of 4-pyridoxolactonase, 5-pyridoxolactone bound | x-ray diffraction | A | — | — |
| Q988B9 | AlphaFold monomer V2.0 prediction for 4-pyridoxolactonase (Q988B9) | predicted | A | — | — |
Ligands
Experiment against prediction
- 4KEP chain A against the predicted model Q988B9: TM-score 0.97, RMSD 0.44 Å
- 4KEP chain A against the predicted model Q988B9: TM-score 0.97, RMSD 0.44 Å
- 3AJ3 chain A against the predicted model Q988B9: TM-score 0.97, RMSD 0.50 Å
- 3AJ3 chain A against the predicted model Q988B9: TM-score 0.97, RMSD 0.50 Å
- 4KEQ chain A against the predicted model Q988B9: TM-score 0.98, RMSD 0.37 Å
- 4KEQ chain A against the predicted model Q988B9: TM-score 0.98, RMSD 0.37 Å
Elsewhere
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