UniProt Q8ZQC8
Secreted effector protein sopD2 (Q8ZQC8)
Secreted effector protein sopD2 (UniProt Q8ZQC8): 2 experimental structures and 1 predicted model on GenesisL1, 16 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q8ZQC8
- Protein
- Secreted effector protein sopD2
- Experimental structures
- 2
- Predicted models
- 1
- Pockets
- 16 · 2 records with a druggable one
Structures
3 records of Q8ZQC8 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5CQ9 | Crystal structure of SopD2, a type III secreted virulence effector from Salmonella enterica | x-ray diffraction | A, B | — | 7 (best 0.68) |
| 5CQ9 | Crystal structure of SOPD2, a type III secreted virulence effector from salmonella enterica | x-ray diffraction | A, B | — | 7 (best 0.68) |
| Q8ZQC8 | AlphaFold monomer V2.0 prediction for secreted effector protein SOPD2 (Q8ZQC8) | predicted | A | — | 2 (best 0.43) |
Experiment against prediction
- 5CQ9 chain A against the predicted model Q8ZQC8: TM-score 0.93, RMSD 2.25 Å
- 5CQ9 chain A against the predicted model Q8ZQC8: TM-score 0.93, RMSD 2.25 Å
- 5CQ9 chain B against the predicted model Q8ZQC8: TM-score 0.91, RMSD 2.28 Å
- 5CQ9 chain B against the predicted model Q8ZQC8: TM-score 0.91, RMSD 2.28 Å
Elsewhere
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