UniProt Q8ZIK3
LPS-assembly protein LptD (Q8ZIK3)
LPS-assembly protein LptD (UniProt Q8ZIK3): 2 experimental structures and 1 predicted model on GenesisL1, 46 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q8ZIK3
- Protein
- LPS-assembly protein LptD
- Experimental structures
- 2
- Predicted models
- 1
- Pockets
- 46 · 3 records with a druggable one
Structures
3 records of Q8ZIK3 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5IXM | The LPS Transporter LptDE from Yersinia pestis, core complex | x-ray diffraction | A, C, E, G | — | 18 (best 0.88) |
| 5IXM | The lps transporter lptde from yersinia pestis, core complex | x-ray diffraction | A, C, E, G | — | 18 (best 0.88) |
| Q8ZIK3 | AlphaFold monomer V2.0 prediction for lps-assembly protein lptd (Q8ZIK3) | predicted | A | — | 10 (best 0.75) |
Experiment against prediction
- 5IXM chain C against the predicted model Q8ZIK3: TM-score 0.99, RMSD 0.88 Å
- 5IXM chain C against the predicted model Q8ZIK3: TM-score 0.99, RMSD 0.88 Å
- 5IXM chain E against the predicted model Q8ZIK3: TM-score 0.99, RMSD 0.86 Å
- 5IXM chain E against the predicted model Q8ZIK3: TM-score 0.99, RMSD 0.86 Å
- 5IXM chain A against the predicted model Q8ZIK3: TM-score 0.99, RMSD 0.98 Å
- 5IXM chain A against the predicted model Q8ZIK3: TM-score 0.99, RMSD 0.98 Å
- 5IXM chain G against the predicted model Q8ZIK3: TM-score 0.99, RMSD 0.96 Å
- 5IXM chain G against the predicted model Q8ZIK3: TM-score 0.99, RMSD 0.96 Å
Elsewhere
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