UniProt Q8W4L5
B3 domain-containing transcription repressor VAL1 (Q8W4L5)
B3 domain-containing transcription repressor VAL1 (UniProt Q8W4L5): 14 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 21 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- Q8W4L5
- Protein
- B3 domain-containing transcription repressor VAL1
- Experimental structures
- 14
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 21 · 4 records with a druggable one
Structures
15 records of Q8W4L5 in the MolNFT archive: 14 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5YUG | AtVAL1 PHD-Like domain in the P31 space group | x-ray diffraction | A, B, E, G | ZN | 4 (best 0.70) |
| 5YUG | ATVAL1 phd-like domain in the P31 space group | x-ray diffraction | A, B, E, G | ZN | — |
| 5YUH | AtVAL1 PHD-Like domain in the P6122 space group | x-ray diffraction | A | ZN | — |
| 5YUH | ATVAL1 phd-like domain in the P6122 space group | x-ray diffraction | A | ZN | — |
| 5YZY | AtVAL1 B3 domain in complex with 13bp-DNA | x-ray diffraction | C | HG | 1 (best 0.43) |
| 5YZY | ATVAL1 B3 domain in complex with 13BP-DNA | x-ray diffraction | C | HG | — |
| 5YZZ | AtVAL1 B3 domain in complex with 13bp-DNA | x-ray diffraction | C | — | 1 (best 0.47) |
| 5YZZ | ATVAL1 B3 domain in complex with 13BP-DNA | x-ray diffraction | C | — | — |
| 5Z00 | AtVAL1 B3 domain in complex with 15bp-DNA | x-ray diffraction | C, G, K, M | — | 7 (best 0.77) |
| 5Z00 | ATVAL1 B3 domain in complex with 15BP-DNA | x-ray diffraction | C, G, K, M | — | — |
| 6FAS | Crystal structure of VAL1 B3 domain in complex with cognate DNA | x-ray diffraction | A, B | — | 2 (best 0.70) |
| 6FAS | Crystal structure of VAL1 B3 domain in complex with cognate DNA | x-ray diffraction | A, B | — | — |
| 6J9A | Crystal structure of Arabidopsis thaliana VAL1 in complex with FLC DNA fragment | x-ray diffraction | A | — | 1 (best 0.39) |
| 6J9A | Crystal structure of arabidopsis thaliana VAL1 in complex with flc DNA fragment | x-ray diffraction | A | — | — |
| Q8W4L5 | AlphaFold monomer V2.0 prediction for B3 domain-containing transcription repressor VAL1 (Q8W4L5) | predicted | A | — | 5 (best 0.66) |
Ligands
Experiment against prediction
- 6J9A chain A against the predicted model Q8W4L5: TM-score 0.98, RMSD 0.56 Å
- 6J9A chain A against the predicted model Q8W4L5: TM-score 0.98, RMSD 0.56 Å
- 6FAS chain A against the predicted model Q8W4L5: TM-score 0.98, RMSD 1.04 Å
- 6FAS chain A against the predicted model Q8W4L5: TM-score 0.98, RMSD 1.04 Å
- 5YZZ chain C against the predicted model Q8W4L5: TM-score 0.97, RMSD 0.80 Å
- 5YZZ chain C against the predicted model Q8W4L5: TM-score 0.97, RMSD 0.80 Å
- 5YZY chain C against the predicted model Q8W4L5: TM-score 0.97, RMSD 0.89 Å
- 5YZY chain C against the predicted model Q8W4L5: TM-score 0.97, RMSD 0.89 Å
- 5Z00 chain C against the predicted model Q8W4L5: TM-score 0.97, RMSD 1.00 Å
- 5Z00 chain C against the predicted model Q8W4L5: TM-score 0.97, RMSD 1.00 Å
Elsewhere
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