UniProt Q8RDT4
L-methionine gamma-lyase (Q8RDT4)
L-methionine gamma-lyase (UniProt Q8RDT4), EC 4.4.1.11, 4.4.1.2: 4 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 11 pockets. Binding sites, druggability and experiment against prediction (TM-score)…
- UniProt
- Q8RDT4
- Protein
- L-methionine gamma-lyase
- EC
- 4.4.1.11, 4.4.1.2, 4.4.1.28
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 11 · 2 records with a druggable one
Structures
5 records of Q8RDT4 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6LXU | Crystal structure of methionine gamma-lyase from Fusobacterium nucleatum | x-ray diffraction | A | NO3 | — |
| 6LXU | Crystal structure of methionine gamma-lyase from fusobacterium nucleatum | x-ray diffraction | A | NO3 | — |
| 7BQW | Crystal structure of Methionine gamma-lyase from Fusobacterium nucleatum | x-ray diffraction | A, B, C, D | — | 8 (best 0.76) |
| 7BQW | Crystal structure of methionine gamma-lyase from fusobacterium nucleatum | x-ray diffraction | A, B, C, D | — | — |
| Q8RDT4 | AlphaFold monomer V2.0 prediction for L-methionine gamma-lyase (Q8RDT4) | predicted | A | — | 3 (best 0.64) |
Ligands
- NO3 · Nitrate ion · in 2 records
Experiment against prediction
- 6LXU chain A against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.57 Å
- 6LXU chain A against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.57 Å
- 7BQW chain D against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.71 Å
- 7BQW chain D against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.71 Å
- 7BQW chain A against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.74 Å
- 7BQW chain A against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.74 Å
- 7BQW chain B against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.74 Å
- 7BQW chain B against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.74 Å
- 7BQW chain C against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.73 Å
- 7BQW chain C against the predicted model Q8RDT4: TM-score 0.99, RMSD 0.73 Å
Elsewhere
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