UniProt Q8INK6
Isoform A of Peptidoglycan-recognition protein LB (Q8INK6)
Isoform A of Peptidoglycan-recognition protein LB (UniProt Q8INK6), EC 3.5.1.28: 4 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 8 pockets. Binding sites, druggability and experiment against…
- UniProt
- Q8INK6
- Protein
- Isoform A of Peptidoglycan-recognition protein LB
- EC
- 3.5.1.28
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 8 · 2 records with a druggable one
Structures
5 records of Q8INK6 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7NSX | Drosophila PGRP-LB wild-type | x-ray diffraction | AAA | ZN | 1 (best 0.31) |
| 7NSY | Drosophila PGRP-LB C160S mutant | x-ray diffraction | AAA, BBB | — | 1 (best 0.80) |
| 7NSZ | Drosophila PGRP-LB Y78F mutant | x-ray diffraction | AAA | ZN, NA | 1 (best 0.38) |
| 7NT0 | Drosophila PGRP-LB Y78F mutant in complex with tracheal cytotoxin (TCT) | x-ray diffraction | AAA, BBB | ZN, MLD | 3 (best 0.68) |
| Q8INK6 | AlphaFold monomer V2.0 prediction for peptidoglycan-recognition protein lb (Q8INK6) | predicted | A | — | 2 (best 0.40) |
Ligands
Experiment against prediction
- 7NSZ chain AAA against the predicted model Q8INK6: TM-score 0.99, RMSD 0.41 Å
- 7NSX chain AAA against the predicted model Q8INK6: TM-score 0.99, RMSD 0.54 Å
- 7NSY chain AAA against the predicted model Q8INK6: TM-score 0.97, RMSD 1.19 Å
- 7NT0 chain BBB against the predicted model Q8INK6: TM-score 0.97, RMSD 0.22 Å
- 7NT0 chain AAA against the predicted model Q8INK6: TM-score 0.97, RMSD 0.22 Å
- 7NSY chain BBB against the predicted model Q8INK6: TM-score 0.96, RMSD 1.52 Å
Elsewhere
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