UniProt Q8DKB5
Carbon dioxide concentrating mechanism protein (Q8DKB5)
Carbon dioxide concentrating mechanism protein (UniProt Q8DKB5): 8 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q8DKB5
- Protein
- Carbon dioxide concentrating mechanism protein
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 3
Structures
9 records of Q8DKB5 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3KWC | Oxidized, active structure of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KWC | Oxidized, active structure of the beta-carboxysomal gamma-carbonic anhydrase, ccmm | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KWD | Inactive truncation of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM, form 1 | x-ray diffraction | A | — | — |
| 3KWD | Inactive truncation of the beta-carboxysomal gamma-carbonic anhydrase, ccmm, form 1 | x-ray diffraction | A | — | — |
| 3KWE | Inactive truncation of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM, form 2 | x-ray diffraction | A | — | — |
| 3KWE | Inactive truncation of the beta-carboxysomal gamma-carbonic anhydrase, ccmm, form 2 | x-ray diffraction | A | — | — |
| 6MR1 | RbcS-like subdomain of CcmM | x-ray diffraction | A, B | CO, CL, SCN | — |
| 6MR1 | Rbcs-like subdomain of ccmm | x-ray diffraction | A, B | CO, CL, SCN | — |
| Q8DKB5 | AlphaFold monomer V2.0 prediction for carboxysome assembly protein ccmm (Q8DKB5) | predicted | A | — | — |
Ligands
Experiment against prediction
- 3KWC chain E against the predicted model Q8DKB5: TM-score 1.00, RMSD 0.32 Å
- 3KWC chain E against the predicted model Q8DKB5: TM-score 1.00, RMSD 0.32 Å
- 3KWC chain D against the predicted model Q8DKB5: TM-score 1.00, RMSD 0.34 Å
- 3KWC chain D against the predicted model Q8DKB5: TM-score 1.00, RMSD 0.34 Å
- 3KWC chain C against the predicted model Q8DKB5: TM-score 1.00, RMSD 0.35 Å
- 3KWC chain C against the predicted model Q8DKB5: TM-score 1.00, RMSD 0.35 Å
- 3KWC chain B against the predicted model Q8DKB5: TM-score 1.00, RMSD 0.36 Å
- 3KWC chain B against the predicted model Q8DKB5: TM-score 1.00, RMSD 0.36 Å
- 3KWC chain F against the predicted model Q8DKB5: TM-score 0.99, RMSD 0.43 Å
- 3KWC chain F against the predicted model Q8DKB5: TM-score 0.99, RMSD 0.43 Å
Elsewhere
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