UniProt Q8C0J2
Autophagy-related protein 16-1 (Q8C0J2)
Autophagy-related protein 16-1 (UniProt Q8C0J2): 6 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 17 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q8C0J2
- Protein
- Autophagy-related protein 16-1
- Experimental structures
- 6
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 17 · 2 records with a druggable one
Structures
7 records of Q8C0J2 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6SUR | The Rab33B-Atg16L1 crystal structure | x-ray diffraction | I, J, K, L, M, N | — | 6 (best 0.54) |
| 6SUR | The RAB33B-ATG16L1 crystal structure | x-ray diffraction | I, J, K, L, M, N | — | — |
| 6Y09 | Crystal structure of Atg16L in complex with GTP-bound Rab33B (Q92L) | x-ray diffraction | C, D | PO4 | 6 (best 0.49) |
| 6Y09 | Crystal structure of ATG16L in complex with GTP-bound RAB33B (Q92L) | x-ray diffraction | C, D | PO4 | — |
| 6ZAY | Crystal structure of Atg16L in complex with GDP-bound Rab33B | x-ray diffraction | C, D | PO4 | 5 (best 0.52) |
| 6ZAY | Crystal structure of ATG16L in complex with GDP-bound RAB33B | x-ray diffraction | C, D | PO4 | — |
| Q8C0J2 | AlphaFold monomer V2.0 prediction for autophagy-related protein 16-1 (Q8C0J2) | predicted | A | — | — |
Ligands
- PO4 · Phosphate ion · in 4 records
Experiment against prediction
- 6SUR chain N against the predicted model Q8C0J2: TM-score 0.97, RMSD 0.44 Å
- 6SUR chain N against the predicted model Q8C0J2: TM-score 0.97, RMSD 0.44 Å
- 6SUR chain J against the predicted model Q8C0J2: TM-score 0.95, RMSD 0.55 Å
- 6SUR chain J against the predicted model Q8C0J2: TM-score 0.95, RMSD 0.55 Å
- 6SUR chain K against the predicted model Q8C0J2: TM-score 0.92, RMSD 0.68 Å
- 6SUR chain K against the predicted model Q8C0J2: TM-score 0.92, RMSD 0.68 Å
- 6SUR chain L against the predicted model Q8C0J2: TM-score 0.92, RMSD 0.72 Å
- 6SUR chain L against the predicted model Q8C0J2: TM-score 0.92, RMSD 0.72 Å
- 6SUR chain I against the predicted model Q8C0J2: TM-score 0.87, RMSD 0.92 Å
- 6SUR chain I against the predicted model Q8C0J2: TM-score 0.87, RMSD 0.92 Å
Elsewhere
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