UniProt Q8BX09
Retinoblastoma-binding protein 5 (Q8BX09)
Retinoblastoma-binding protein 5 (UniProt Q8BX09): 5 experimental structures and 1 predicted model on GenesisL1, 3 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q8BX09
- Protein
- Retinoblastoma-binding protein 5
- Experimental structures
- 5
- Predicted models
- 1
- Pockets
- 3 · 1 record with a druggable one
Structures
6 records of Q8BX09 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2XL2 | WDR5 in complex with an RBBP5 peptide recruited to novel site | x-ray diffraction | C, D | — | — |
| 2XL2 | WDR5 in complex with an RBBP5 peptide recruited to novel site | x-ray diffraction | C, D | — | — |
| 2XL3 | WDR5 in complex with an RBBP5 peptide and histone H3 peptide | x-ray diffraction | C, E | — | — |
| 2XL3 | WDR5 in complex with an RBBP5 peptide and histone H3 peptide | x-ray diffraction | C, E | — | — |
| 5OV3 | Structure of the RBBP5 beta-propeller domain | x-ray diffraction | A, B, C | — | — |
| Q8BX09 | AlphaFold monomer V2.0 prediction for retinoblastoma-binding protein 5 (Q8BX09) | predicted | A | — | 3 (best 0.84) |
Experiment against prediction
- 5OV3 chain B against the predicted model Q8BX09: TM-score 0.96, RMSD 1.35 Å
- 5OV3 chain A against the predicted model Q8BX09: TM-score 0.95, RMSD 1.42 Å
- 5OV3 chain C against the predicted model Q8BX09: TM-score 0.77, RMSD 0.34 Å
- 2XL2 chain C against the predicted model Q8BX09: TM-score 0.61, RMSD 0.62 Å
- 2XL2 chain C against the predicted model Q8BX09: TM-score 0.61, RMSD 0.62 Å
- 2XL3 chain E against the predicted model Q8BX09: TM-score 0.60, RMSD 0.55 Å
- 2XL3 chain E against the predicted model Q8BX09: TM-score 0.60, RMSD 0.55 Å
- 2XL3 chain C against the predicted model Q8BX09: TM-score 0.59, RMSD 0.71 Å
- 2XL3 chain C against the predicted model Q8BX09: TM-score 0.59, RMSD 0.71 Å
Elsewhere
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