UniProt Q775D7
Avd (Q775D7)
Avd (UniProt Q775D7): 9 experimental structures on GenesisL1, 49 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.
- UniProt
- Q775D7
- Protein
- Avd
- Experimental structures
- 9
- Predicted models
- 0
- Pockets
- 49 · 7 records with a druggable one
Structures
9 records of Q775D7 in the MolNFT archive: 9 experimental, 0 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4DWL | Avd molecule from Bordetella bacteriophage DGR | x-ray diffraction | A, B, E, C, D | — | — |
| 4DWL | Avd molecule from bordetella bacteriophage dgr | x-ray diffraction | A, B, E, C, D | — | — |
| 8UB7 | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Active state… | electron microscopy | B, C, D, E, F | — | 6 (best 0.81) |
| 8UB8 | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Pre-active State… | electron microscopy | B, C, D, E, F | — | 9 (best 0.81) |
| 8UB9 | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase- Active state… | electron microscopy | B, C, D, E, F | — | 7 (best 0.81) |
| 8UBA | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Pre-active state… | electron microscopy | B, C, D, E, F | — | 5 (best 0.81) |
| 8UBB | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Active State… | electron microscopy | B, C, D, E, F | — | 8 (best 0.80) |
| 8UBD | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Pre-active State 2 | electron microscopy | B, C, D, E, F | — | 6 (best 0.82) |
| 8UBE | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Resting State 1a | electron microscopy | B, C, D, E, F | — | 8 (best 0.82) |
Experiment against prediction
- 8UB8 chain E against the predicted model Q9FA38: TM-score 0.36, RMSD 3.92 Å
- 8UB7 chain E against the predicted model Q9FA38: TM-score 0.36, RMSD 3.92 Å
- 8UB9 chain E against the predicted model Q9FA38: TM-score 0.36, RMSD 3.88 Å
- 8UB9 chain D against the predicted model Q9FA38: TM-score 0.36, RMSD 4.02 Å
- 8UBD chain E against the predicted model Q9FA38: TM-score 0.36, RMSD 3.80 Å
- 8UBD chain D against the predicted model Q9FA38: TM-score 0.36, RMSD 4.03 Å
- 8UB9 chain F against the predicted model Q9FA38: TM-score 0.36, RMSD 3.90 Å
- 8UBB chain E against the predicted model Q9FA38: TM-score 0.36, RMSD 3.96 Å
- 8UBA chain E against the predicted model Q9FA38: TM-score 0.36, RMSD 3.93 Å
- 8UBD chain F against the predicted model Q9FA38: TM-score 0.36, RMSD 3.91 Å
Elsewhere
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