UniProt Q72I28
50S ribosomal protein L36 (Q72I28)
50S ribosomal protein L36 (UniProt Q72I28): 16 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q72I28
- Protein
- 50S ribosomal protein L36
- Experimental structures
- 16
- Predicted models
- 1
- Ligands
- 2
Structures
17 records of Q72I28 in the MolNFT archive: 16 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4V4I | Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements. | x-ray diffraction | b | — | — |
| 4V4J | Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. | x-ray diffraction | b | — | — |
| 4V68 | T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex… | electron microscopy | B9 | — | — |
| 4V9J | 70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | B9, D9 | — | — |
| 4V9K | 70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | B9, D9 | — | — |
| 4V9L | 70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | B9, D9 | — | — |
| 4V9M | 70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | B9, D9 | — | — |
| 4W29 | 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA… | x-ray diffraction | B9, D9 | — | — |
| 4ZER | Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | x-ray diffraction | 19, 29 | MG, ZN | — |
| 5J4D | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | x-ray diffraction | GA, LC | MG, ZN | — |
| 5V8I | Thermus thermophilus 70S ribosome lacking ribosomal protein uS17 | x-ray diffraction | 19, 29 | MG, ZN | — |
| 6B4V | Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome | x-ray diffraction | GA, KC | ZN, MG | — |
| 6BOH | Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the… | x-ray diffraction | GA, LC | ZN | — |
| 6BOK | E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome | x-ray diffraction | GA, JC | MG, ZN | — |
| 6N1D | X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric… | x-ray diffraction | AL36, BL36 | MG | — |
| 6Q95 | Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome | electron microscopy | f | ZN | — |
| Q72I28 | AlphaFold monomer V2.0 prediction for 50S ribosomal protein L36 (Q72I28) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5V8I chain 19 against the predicted model Q72I28: TM-score 0.94, RMSD 0.42 Å
- 4ZER chain 19 against the predicted model Q72I28: TM-score 0.94, RMSD 0.44 Å
- 4ZER chain 29 against the predicted model Q72I28: TM-score 0.93, RMSD 0.47 Å
- 5V8I chain 29 against the predicted model Q72I28: TM-score 0.93, RMSD 0.47 Å
- 5J4D chain LC against the predicted model Q72I28: TM-score 0.92, RMSD 0.51 Å
- 5J4D chain GA against the predicted model Q72I28: TM-score 0.92, RMSD 0.51 Å
- 6B4V chain GA against the predicted model Q72I28: TM-score 0.89, RMSD 0.61 Å
- 6B4V chain KC against the predicted model Q72I28: TM-score 0.89, RMSD 0.61 Å
- 6Q95 chain f against the predicted model Q72I28: TM-score 0.89, RMSD 1.15 Å
- 6BOH chain GA against the predicted model Q72I28: TM-score 0.87, RMSD 0.68 Å
Elsewhere
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