UniProt Q72GV5
50S ribosomal protein L9 (Q72GV5)
50S ribosomal protein L9 (UniProt Q72GV5): 17 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q72GV5
- Protein
- 50S ribosomal protein L9
- Experimental structures
- 17
- Predicted models
- 1
- Ligands
- 1
Structures
18 records of Q72GV5 in the MolNFT archive: 17 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4V4I | Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements. | x-ray diffraction | G | — | — |
| 4V4J | Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. | x-ray diffraction | G | — | — |
| 4V5E | Insights into translational termination from the structure of RF2 bound to the ribosome | x-ray diffraction | DI | — | — |
| 4V63 | Structural basis for translation termination on the 70S ribosome. | x-ray diffraction | BI, DI | — | — |
| 4V67 | Crystal structure of a translation termination complex formed with release factor RF2. | x-ray diffraction | BI, DI | — | — |
| 4V7P | Recognition of the amber stop codon by release factor RF1. | x-ray diffraction | BH, CH | — | — |
| 4V83 | Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S… | x-ray diffraction | BH, DH | — | — |
| 4V84 | Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome. | x-ray diffraction | BH, DH | — | — |
| 4V9N | Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. | x-ray diffraction | BI, DI | — | — |
| 4V9Q | Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome. | x-ray diffraction | AI, CI | — | — |
| 4XEJ | IRES bound to bacterial Ribosome | x-ray diffraction | AL09, BL09 | — | — |
| 5J4D | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | x-ray diffraction | J, OB | MG | — |
| 5V8I | Thermus thermophilus 70S ribosome lacking ribosomal protein uS17 | x-ray diffraction | 1I, 2I | MG | — |
| 6B4V | Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome | x-ray diffraction | J, NB | MG | — |
| 6BOH | Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the… | x-ray diffraction | J, OB | MG | — |
| 6BOK | E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome | x-ray diffraction | J, MB | MG | — |
| 6N1D | X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric… | x-ray diffraction | AL09, BL09 | — | — |
| Q72GV5 | AlphaFold monomer V2.0 prediction for 50S ribosomal protein L9 (Q72GV5) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 5 records
Experiment against prediction
- 4V9Q chain AI against the predicted model Q72GV5: TM-score 0.97, RMSD 0.85 Å
- 5V8I chain 1I against the predicted model Q72GV5: TM-score 0.96, RMSD 0.88 Å
- 5J4D chain J against the predicted model Q72GV5: TM-score 0.96, RMSD 0.95 Å
- 5J4D chain OB against the predicted model Q72GV5: TM-score 0.96, RMSD 0.95 Å
- 4V7P chain BH against the predicted model Q72GV5: TM-score 0.96, RMSD 0.94 Å
- 6BOH chain J against the predicted model Q72GV5: TM-score 0.96, RMSD 0.99 Å
- 4XEJ chain BL09 against the predicted model Q72GV5: TM-score 0.96, RMSD 0.95 Å
- 4V63 chain BI against the predicted model Q72GV5: TM-score 0.96, RMSD 0.95 Å
- 6BOH chain OB against the predicted model Q72GV5: TM-score 0.96, RMSD 0.99 Å
- 6BOK chain J against the predicted model Q72GV5: TM-score 0.96, RMSD 1.01 Å
Elsewhere
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