UniProt Q6CM04
Small ribosomal subunit protein eS6 (Q6CM04)
Small ribosomal subunit protein eS6 (UniProt Q6CM04): 25 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 9 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q6CM04
- Protein
- Small ribosomal subunit protein eS6
- Experimental structures
- 25
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 9 · 8 records with a druggable one
Structures
26 records of Q6CM04 in the MolNFT archive: 25 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3J80 | CryoEM structure of 40S-eIF1-eIF1A preinitiation complex | electron microscopy | G | — | — |
| 3J80 | Cryoem structure of 40S-EIF1-EIF1A preinitiation complex | electron microscopy | G | — | — |
| 3J81 | CryoEM structure of a partial yeast 48S preinitiation complex | electron microscopy | G | — | — |
| 3J81 | Cryoem structure of a partial yeast 48S preinitiation complex | electron microscopy | G | — | — |
| 3JAM | CryoEM structure of 40S-eIF1A-eIF1 complex from yeast | electron microscopy | G | — | — |
| 3JAM | Cryoem structure of 40S-EIF1A-EIF1 complex from yeast | electron microscopy | G | — | — |
| 3JAP | Structure of a partial yeast 48S preinitiation complex in closed conformation | electron microscopy | G | — | — |
| 3JAP | Structure of a partial yeast 48S preinitiation complex in closed conformation | electron microscopy | G | — | — |
| 3JAQ | Structure of a partial yeast 48S preinitiation complex in open conformation | electron microscopy | G | — | — |
| 5IT7 | Structure of the Kluyveromyces lactis 80S ribosome in complex with the cricket paralysis virus IRES… | electron microscopy | G | MG | — |
| 5IT9 | Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket… | electron microscopy | G | MG | 1 (best 0.85) |
| 5IT9 | Structure of the yeast kluyveromyces lactis small ribosomal subunit in complex with the cricket… | electron microscopy | G | — | — |
| 6FYX | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) | electron microscopy | G | MG | 1 (best 0.84) |
| 6FYY | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) | electron microscopy | G | — | 1 (best 0.83) |
| 6GSM | Structure of a partial yeast 48S preinitiation complex in open conformation. | electron microscopy | G | MG | — |
| 6UZ7 | K.lactis 80S ribosome with p/PE tRNA and eIF5B | electron microscopy | G | — | — |
| 8I7J | Yeast 40S-eIF4B - partially open conformation of the 40S head | electron microscopy | G | — | 2 (best 0.84) |
| 8RW1 | Structure of a yeast 48S-AUC preinitiation complex in closed conformation | electron microscopy | G | MG | — |
| 8S8D | Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2) | electron microscopy | G | MG | 1 (best 0.82) |
| 8S8E | Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.1) | electron microscopy | G | MG | — |
| 8S8F | Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.2) | electron microscopy | G | — | — |
| 8S8G | Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.1) | electron microscopy | G | — | 1 (best 0.82) |
| 8S8H | Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.2) | electron microscopy | G | — | — |
| 8S8J | Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-eIF5) | electron microscopy | G | — | 1 (best 0.82) |
| 8S8K | Structure of a yeast 48S-AUC preinitiation complex in swivelled conformation (model… | electron microscopy | G | — | 1 (best 0.84) |
| Q6CM04 | AlphaFold monomer V2.0 prediction for 40S ribosomal protein S6 (Q6CM04) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 7 records
Experiment against prediction
- 3JAM chain G against the predicted model Q6CM04: TM-score 0.97, RMSD 1.05 Å
- 3JAM chain G against the predicted model Q6CM04: TM-score 0.97, RMSD 1.05 Å
- 8S8K chain G against the predicted model Q6CM04: TM-score 0.97, RMSD 1.08 Å
- 8S8D chain G against the predicted model Q6CM04: TM-score 0.97, RMSD 1.07 Å
- 8RW1 chain G against the predicted model Q6CM04: TM-score 0.97, RMSD 1.08 Å
- 3JAP chain G against the predicted model Q6CM04: TM-score 0.96, RMSD 1.12 Å
- 3JAP chain G against the predicted model Q6CM04: TM-score 0.96, RMSD 1.12 Å
- 8S8G chain G against the predicted model Q6CM04: TM-score 0.96, RMSD 1.15 Å
- 8S8E chain G against the predicted model Q6CM04: TM-score 0.96, RMSD 1.15 Å
- 8S8F chain G against the predicted model Q6CM04: TM-score 0.96, RMSD 1.16 Å
Elsewhere
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