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UniProt Q5MQD0

Spike glycoprotein (Q5MQD0)

Spike glycoprotein (UniProt Q5MQD0): 10 experimental structures on GenesisL1, 5 ligands bound, 36 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.

UniProt
Q5MQD0
Protein
Spike glycoprotein
Experimental structures
10
Predicted models
0
Ligands
5
Pockets
36 · 6 records with a druggable one

Structures

10 records of Q5MQD0 in the MolNFT archive: 10 experimental, 0 predicted.

EntryTitleMethodChainsLigandsPockets
5GNBCrystal Structure of the Receptor Binding Domain of the Spike Glycoprotein of Human Betacoronavirus…x-ray diffractionANAG1 (best 0.48)
5GNBCrystal structure of the receptor binding domain of the spike glycoprotein of human betacoronavirus…x-ray diffractionA——
5KWBCrystal Structure of the Receptor Binding Domain of the Spike Glycoprotein of Human Betacoronavirus…x-ray diffractionAGLC, FRU, NAG, MG—
5KWBCrystal structure of the receptor binding domain of the spike glycoprotein of human betacoronavirus…x-ray diffractionAGLC, FRU, NAG, MG—
8DGWCrystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing…x-ray diffractionG, I, J, K—5 (best 0.66)
8VGTStructure of the HKU1 RBD bound to the human TMPRSS2 receptorelectron microscopyANAG1 (best 0.55)
8Y7XStructure of HCoV-HKU1A spike in the functionally anchored-3up conformation with 3TMPRSS2electron microscopyB, A, CNAG18 (best 0.88)
8Y7YLocal structure of HCoV-HKU1A spike in complex with TMPRSS2 and glycanelectron microscopyA, BNAG, MJJ6 (best 0.55)
8YOYStructure of HKU1A RBD with TMPRSS2electron microscopyA—1 (best 0.53)
9IZNCrystal structure of HKU1A RBD bound to TMPRSS2x-ray diffractionANAG4 (best 0.64)

Ligands

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · in 7 records
  • FRU · beta-D-fructofuranose · in 2 records
  • GLC · alpha-D-glucopyranose · in 2 records
  • MG · Magnesium ion · in 2 records
  • MJJ · methyl 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid · in 1 record

Elsewhere

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