UniProt Q5L3Y2
Pyridoxal 5'-phosphate synthase subunit pdxs (Q5L3Y2)
Pyridoxal 5'-phosphate synthase subunit pdxs (UniProt Q5L3Y2): 6 experimental structures and 1 predicted model on GenesisL1, 1 pocket. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q5L3Y2
- Protein
- Pyridoxal 5'-phosphate synthase subunit pdxs
- Experimental structures
- 6
- Predicted models
- 1
- Pockets
- 1 · 1 record with a druggable one
Structures
7 records of Q5L3Y2 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4WXY | PLPS (inactive glutaminase mutant) co-crystallized with glutamine and R5P. | x-ray diffraction | A, C, E, G, I, K | — | — |
| 4WXY | Plps (inactive glutaminase mutant) co-crystallized with glutamine and R5P. | x-ray diffraction | A, C, E, G, I, K | — | — |
| 4WXZ | PdxS (G. stearothermophilus) co-crystallized with R5P | x-ray diffraction | A, B, C, D, E, F | — | — |
| 4WXZ | Pdxs (G. stearothermophilus) co-crystallized with R5P | x-ray diffraction | A, B, C, D, E, F | — | — |
| 4WY0 | PdxS (G. stearothermophilus) co-crystallized with R5P in the presence of ammonia. | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | — | — |
| 4WY0 | Pdxs (G. stearothermophilus) co-crystallized with R5P in the presence of ammonia. | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | — | — |
| Q5L3Y2 | AlphaFold monomer V2.0 prediction for pyridoxal 5'-phosphate synthase subunit pdxs (Q5L3Y2) | predicted | A | — | 1 (best 0.73) |
Experiment against prediction
- 4WXY chain C against the predicted model Q5L3Y2: TM-score 1.00, RMSD 0.41 Å
- 4WXY chain C against the predicted model Q5L3Y2: TM-score 1.00, RMSD 0.41 Å
- 4WXY chain E against the predicted model Q5L3Y2: TM-score 1.00, RMSD 0.42 Å
- 4WXY chain E against the predicted model Q5L3Y2: TM-score 1.00, RMSD 0.42 Å
- 4WXY chain A against the predicted model Q5L3Y2: TM-score 1.00, RMSD 0.42 Å
- 4WXY chain A against the predicted model Q5L3Y2: TM-score 1.00, RMSD 0.42 Å
- 4WXZ chain C against the predicted model Q5L3Y2: TM-score 0.99, RMSD 0.69 Å
- 4WXZ chain C against the predicted model Q5L3Y2: TM-score 0.99, RMSD 0.69 Å
- 4WXZ chain A against the predicted model Q5L3Y2: TM-score 0.99, RMSD 0.71 Å
- 4WXZ chain A against the predicted model Q5L3Y2: TM-score 0.99, RMSD 0.71 Å
Elsewhere
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