UniProt Q5JER9
Endonuclease EndoMS (Q5JER9)
Endonuclease EndoMS (UniProt Q5JER9), EC 3.1.-.-: 12 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 12 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q5JER9
- Protein
- Endonuclease EndoMS
- EC
- 3.1.-.-
- Experimental structures
- 12
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 12 · 3 records with a druggable one
Structures
13 records of Q5JER9 in the MolNFT archive: 12 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5GKE | Structure of EndoMS-dsDNA1 complex | x-ray diffraction | A, B | MG | 3 (best 0.79) |
| 5GKE | Structure of endoms-DSDNA1 complex | x-ray diffraction | A, B | — | — |
| 5GKF | Structure of EndoMS-dsDNA1' complex | x-ray diffraction | A, B | MG | 6 (best 0.84) |
| 5GKF | Structure of endoms-DSDNA1' complex | x-ray diffraction | A, B | — | — |
| 5GKG | Structure of EndoMS-dsDNA1'' complex | x-ray diffraction | A, B | MG | — |
| 5GKG | Structure of endoms-DSDNA1'' complex | x-ray diffraction | A, B | — | — |
| 5GKH | Structure of EndoMS-dsDNA2 complex | x-ray diffraction | A, B | MG | — |
| 5GKH | Structure of endoms-DSDNA2 complex | x-ray diffraction | A, B | — | — |
| 5GKI | Structure of EndoMS-dsDNA3 complex | x-ray diffraction | A, B | MG | 3 (best 0.79) |
| 5GKI | Structure of endoms-DSDNA3 complex | x-ray diffraction | A, B | — | — |
| 5GKJ | Structure of EndoMS in apo form | x-ray diffraction | A, B | — | — |
| 5GKJ | Structure of endoms in apo form | x-ray diffraction | A, B | — | — |
| Q5JER9 | AlphaFold monomer V2.0 prediction for endonuclease nucs (Q5JER9) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 5 records
Experiment against prediction
- 5GKE chain A against the predicted model Q5JER9: TM-score 0.99, RMSD 0.47 Å
- 5GKE chain A against the predicted model Q5JER9: TM-score 0.99, RMSD 0.47 Å
- 5GKF chain A against the predicted model Q5JER9: TM-score 0.99, RMSD 0.49 Å
- 5GKF chain A against the predicted model Q5JER9: TM-score 0.99, RMSD 0.49 Å
- 5GKG chain A against the predicted model Q5JER9: TM-score 0.99, RMSD 0.50 Å
- 5GKG chain A against the predicted model Q5JER9: TM-score 0.99, RMSD 0.50 Å
- 5GKH chain A against the predicted model Q5JER9: TM-score 0.99, RMSD 0.51 Å
- 5GKH chain A against the predicted model Q5JER9: TM-score 0.99, RMSD 0.51 Å
- 5GKI chain B against the predicted model Q5JER9: TM-score 0.99, RMSD 0.52 Å
- 5GKF chain B against the predicted model Q5JER9: TM-score 0.99, RMSD 0.53 Å
Elsewhere
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