UniProt Q58241
archaeal nuclease RecJ2 (Q58241)
archaeal nuclease RecJ2 (UniProt Q58241): 5 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 34 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q58241
- Protein
- archaeal nuclease RecJ2
- Experimental structures
- 5
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 34 · 5 records with a druggable one
Structures
6 records of Q58241 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6TVV | Crystal structure of 3'-5' RecJ exonuclease from M. Jannaschii | x-ray diffraction | A, B | MN | 6 (best 0.78) |
| 6TVV | Crystal structure of 3'-5' recj exonuclease from M. jannaschii | x-ray diffraction | A, B | MN | — |
| 7YKV | The structure of archaeal nuclease RecJ2 from Methanocaldococcus jannaschii | x-ray diffraction | A, B | IXK | 9 (best 0.83) |
| 7YOQ | Recj2 and CMP complex from Methanocaldococcus jannaschii | x-ray diffraction | A, B | IY0 | 9 (best 0.83) |
| 7YOR | Recj2 and dCMP complex from Methanocaldococcus jannaschii | x-ray diffraction | A, B | IY9 | 8 (best 0.82) |
| Q58241 | AlphaFold monomer V2.0 prediction for uncharacterized protein MJ0831 (Q58241) | predicted | A | — | 2 (best 0.74) |
Ligands
- MN · Manganese (II) ion · in 2 records
- IXK · [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)furan-3-yl] [5-(6-aminopurin-9-yl)-3-oxidanyl-furan-2-yl]methyl hydrogen phosphate · in 1 record
- IY0 · [5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)furan-2-yl]methyl dihydrogen phosphate · in 1 record
- IY9 · [5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-furan-2-yl]methyl dihydrogen phosphate · in 1 record
Experiment against prediction
- 7YOQ chain B against the predicted model Q58241: TM-score 0.97, RMSD 1.37 Å
- 7YKV chain B against the predicted model Q58241: TM-score 0.96, RMSD 1.35 Å
- 7YOR chain B against the predicted model Q58241: TM-score 0.96, RMSD 1.45 Å
- 6TVV chain B against the predicted model Q58241: TM-score 0.95, RMSD 1.69 Å
- 6TVV chain B against the predicted model Q58241: TM-score 0.95, RMSD 1.69 Å
- 6TVV chain A against the predicted model Q58241: TM-score 0.93, RMSD 2.11 Å
- 6TVV chain A against the predicted model Q58241: TM-score 0.93, RMSD 2.11 Å
- 7YOQ chain A against the predicted model Q58241: TM-score 0.85, RMSD 3.73 Å
- 7YKV chain A against the predicted model Q58241: TM-score 0.85, RMSD 3.61 Å
- 7YOR chain A against the predicted model Q58241: TM-score 0.85, RMSD 3.70 Å
Elsewhere
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