UniProt Q57261
tRNA pseudouridine synthase D (Q57261)
tRNA pseudouridine synthase D (UniProt Q57261), EC 4.2.1.70: 6 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 34 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q57261
- Protein
- tRNA pseudouridine synthase D
- EC
- 4.2.1.70
- Experimental structures
- 6
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 34 · 7 records with a druggable one
Structures
7 records of Q57261 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1SB7 | Crystal structure of the E.coli pseudouridine synthase TruD | x-ray diffraction | A, B | PO4 | 8 (best 0.75) |
| 1SB7 | Crystal structure of the E.COLI pseudouridine synthase trud | x-ray diffraction | A, B | PO4 | 8 (best 0.75) |
| 1SI7 | Structure of E. coli tRNA psi 13 pseudouridine synthase TruD | x-ray diffraction | A | — | 2 (best 0.74) |
| 1SI7 | Structure of E. COLI tRNA psi 13 pseudouridine synthase trud | x-ray diffraction | A | — | 2 (best 0.74) |
| 1SZW | Crystal structure of E. coli tRNA pseudouridine synthase TruD | x-ray diffraction | A, B | — | 6 (best 0.71) |
| 1SZW | Crystal structure of E. COLI tRNA pseudouridine synthase trud | x-ray diffraction | A, B | — | 6 (best 0.71) |
| Q57261 | AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q57261) | predicted | A | — | 2 (best 0.76) |
Ligands
- PO4 · Phosphate ion · in 2 records
Experiment against prediction
- 1SZW chain B against the predicted model Q57261: TM-score 0.99, RMSD 0.47 Å
- 1SZW chain B against the predicted model Q57261: TM-score 0.99, RMSD 0.47 Å
- 1SB7 chain B against the predicted model Q57261: TM-score 0.98, RMSD 0.54 Å
- 1SB7 chain B against the predicted model Q57261: TM-score 0.98, RMSD 0.54 Å
- 1SZW chain A against the predicted model Q57261: TM-score 0.98, RMSD 1.10 Å
- 1SZW chain A against the predicted model Q57261: TM-score 0.98, RMSD 1.10 Å
- 1SB7 chain A against the predicted model Q57261: TM-score 0.97, RMSD 1.05 Å
- 1SB7 chain A against the predicted model Q57261: TM-score 0.97, RMSD 1.05 Å
- 1SI7 chain A against the predicted model Q57261: TM-score 0.97, RMSD 1.15 Å
- 1SI7 chain A against the predicted model Q57261: TM-score 0.97, RMSD 1.15 Å
Elsewhere
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