UniProt Q50297
30S ribosomal protein S13 (Q50297)
30S ribosomal protein S13 (UniProt Q50297): 34 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 36 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q50297
- Protein
- 30S ribosomal protein S13
- Experimental structures
- 34
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 36 · 27 records with a druggable one
Structures
35 records of Q50297 in the MolNFT archive: 34 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7OOC | Mycoplasma pneumoniae 30S subunit of ribosomes in chloramphenicol-treated cells | electron microscopy | L | — | 2 (best 0.84) |
| 7OOC | Mycoplasma pneumoniae 30S subunit of ribosomes in chloramphenicol- treated cells | electron microscopy | L | — | 2 (best 0.84) |
| 7P6Z | Mycoplasma pneumoniae 70S ribosome in untreated cells | electron microscopy | L | — | 2 (best 0.85) |
| 7PAH | 70S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.89) |
| 7PAI | 70S ribosome with P-site tRNA in Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.83) |
| 7PAJ | 70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.87) |
| 7PAK | 70S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.86) |
| 7PAL | 70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells | electron microscopy | L | — | — |
| 7PAM | 70S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.87) |
| 7PAN | 70S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.83) |
| 7PAO | 70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells | electron microscopy | L | — | 2 (best 0.87) |
| 7PAQ | 70S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.87) |
| 7PAR | 70S ribosome with EF-G, ap/P- and pe/E-site tRNAs in Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.85) |
| 7PAS | 70S ribosome with P/E-site tRNA in Mycoplasma pneumoniae cells | electron microscopy | L | — | — |
| 7PH9 | 70S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.89) |
| 7PHA | 70S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | — |
| 7PHB | 70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.87) |
| 7PHC | 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | — |
| 7PI8 | 70S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.85) |
| 7PI9 | 70S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.86) |
| 7PIA | 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | — |
| 7PIB | 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | 2 (best 0.87) |
| 7PIC | 70S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.85) |
| 7PIO | 70S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.85) |
| 7PIP | 70S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | 1 (best 0.86) |
| 7PIQ | 70S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | 2 (best 0.86) |
| 7PIR | 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells | electron microscopy | L | — | — |
| 7PIS | 70S ribosome with EF-G, A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae… | electron microscopy | L | — | — |
| 7PIT | 70S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae… | electron microscopy | L | — | 1 (best 0.87) |
| 8P6P | Mycoplasma pneumoniae small ribosomal subunit in chloramphenicol-treated cells | electron microscopy | L | MG | 2 (best 0.89) |
| 8P7X | Mycoplasma pneumoniae 70S ribosome in chloramphenicol-treated cells | electron microscopy | L | MG | 2 (best 0.84) |
| 8P7Y | Mycoplasma pneumoniae 70S ribosome with second S4 protein on large subunit | electron microscopy | L | MG | 2 (best 0.87) |
| 8P8V | Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (leading 70S) | electron microscopy | L | MG | 1 (best 0.86) |
| 8P8W | Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (following 70S) | electron microscopy | L | MG | 1 (best 0.83) |
| Q50297 | AlphaFold monomer V2.0 prediction for 30S ribosomal protein S13 (Q50297) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 5 records
Experiment against prediction
- 8P8W chain L against the predicted model Q50297: TM-score 0.87, RMSD 1.63 Å
- 8P6P chain L against the predicted model Q50297: TM-score 0.86, RMSD 1.58 Å
- 8P8V chain L against the predicted model Q50297: TM-score 0.86, RMSD 1.67 Å
- 7OOC chain L against the predicted model Q50297: TM-score 0.86, RMSD 1.69 Å
- 7OOC chain L against the predicted model Q50297: TM-score 0.86, RMSD 1.69 Å
- 8P7X chain L against the predicted model Q50297: TM-score 0.85, RMSD 1.61 Å
- 7P6Z chain L against the predicted model Q50297: TM-score 0.85, RMSD 1.74 Å
- 8P7Y chain L against the predicted model Q50297: TM-score 0.85, RMSD 1.63 Å
- 7PIO chain L against the predicted model Q50297: TM-score 0.82, RMSD 2.08 Å
- 7PAJ chain L against the predicted model Q50297: TM-score 0.81, RMSD 2.07 Å
Elsewhere
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