UniProt Q43133
Geranylgeranyl pyrophosphate synthetase (Q43133)
Geranylgeranyl pyrophosphate synthetase (UniProt Q43133): 4 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 8 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q43133
- Protein
- Geranylgeranyl pyrophosphate synthetase
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 8 · 2 records with a druggable one
Structures
5 records of Q43133 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2J1O | Geranylgeranyl diphosphate synthase from Sinapis alba | x-ray diffraction | A | — | 1 (best 0.53) |
| 2J1O | Geranylgeranyl diphosphate synthase from sinapis alba | x-ray diffraction | A | — | — |
| 2J1P | Geranylgeranyl diphosphate synthase from Sinapis alba in complex with GGPP | x-ray diffraction | A, B | GRG | 7 (best 0.71) |
| 2J1P | Geranylgeranyl diphosphate synthase from sinapis alba in complex with ggpp | x-ray diffraction | A, B | — | — |
| Q43133 | AlphaFold monomer V2.0 prediction for geranylgeranyl pyrophosphate synthase… | predicted | A | — | — |
Ligands
- GRG · Geranylgeranyl diphosphate · in 1 record
Experiment against prediction
- 2J1P chain A against the predicted model Q43133: TM-score 0.98, RMSD 0.92 Å
- 2J1P chain A against the predicted model Q43133: TM-score 0.98, RMSD 0.92 Å
- 2J1O chain A against the predicted model Q43133: TM-score 0.97, RMSD 1.19 Å
- 2J1O chain A against the predicted model Q43133: TM-score 0.97, RMSD 1.19 Å
- 2J1P chain B against the predicted model Q43133: TM-score 0.96, RMSD 1.74 Å
- 2J1P chain B against the predicted model Q43133: TM-score 0.96, RMSD 1.74 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.