UniProt Q39211
DNA-directed RNA polymerases II, IV and V subunit 3 (Q39211)
DNA-directed RNA polymerases II, IV and V subunit 3 (UniProt Q39211): 8 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 21 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- Q39211
- Protein
- DNA-directed RNA polymerases II, IV and V subunit 3
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 21 · 6 records with a druggable one
Structures
9 records of Q39211 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7EU0 | The cryo-EM structure of A. thaliana Pol IV-RDR2 backtracked complex | electron microscopy | C | ZN | 4 (best 0.77) |
| 7EU0 | The cryo-EM structure of a. thaliana pol IV-RDR2 backtracked complex | electron microscopy | C | ZN | — |
| 7EU1 | The cryo-EM structure of A. thaliana Pol IV-RDR2 holoenzyme | electron microscopy | C | ZN | 3 (best 0.77) |
| 7EU1 | The cryo-EM structure of a. thaliana pol IV-RDR2 holoenzyme | electron microscopy | C | ZN | — |
| 8XMB | NTP-bound Pol IV transcription elongation complex | electron microscopy | C | ZN | 3 (best 0.79) |
| 8XMC | Post-translocated Pol IV transcription elongation complex | electron microscopy | C | ZN | 3 (best 0.88) |
| 8XMD | Pre-translocated Pol IV transcription elongation complex | electron microscopy | C | ZN | 3 (best 0.87) |
| 8XME | Backtracked Pol IV transcription elongation complex | electron microscopy | C | ZN | 3 (best 0.79) |
| Q39211 | AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerases II, IV and V subunit 3 (Q39211) | predicted | A | — | 2 (best 0.37) |
Ligands
- ZN · Zinc ion · in 8 records
Experiment against prediction
- 8XMD chain C against the predicted model Q39211: TM-score 0.96, RMSD 1.36 Å
- 8XME chain C against the predicted model Q39211: TM-score 0.96, RMSD 1.37 Å
- 8XMC chain C against the predicted model Q39211: TM-score 0.96, RMSD 1.42 Å
- 8XMB chain C against the predicted model Q39211: TM-score 0.96, RMSD 1.46 Å
- 7EU0 chain C against the predicted model Q39211: TM-score 0.96, RMSD 1.55 Å
- 7EU0 chain C against the predicted model Q39211: TM-score 0.96, RMSD 1.55 Å
- 7EU1 chain C against the predicted model Q39211: TM-score 0.95, RMSD 1.76 Å
- 7EU1 chain C against the predicted model Q39211: TM-score 0.95, RMSD 1.76 Å
Elsewhere
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