UniProt Q39044
Vacuolar-processing enzyme beta-isozyme (Q39044)
Vacuolar-processing enzyme beta-isozyme (UniProt Q39044), EC 3.4.22.34: 2 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 45 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- Q39044
- Protein
- Vacuolar-processing enzyme beta-isozyme
- EC
- 3.4.22.34
- Experimental structures
- 2
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 45 · 3 records with a druggable one
Structures
3 records of Q39044 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6YSA | Crystal structure of Arabidopsis thaliana legumain isoform beta in zymogen state | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | NAG, SO4 | 20 (best 0.81) |
| 6YSA | Crystal structure of arabidopsis thaliana legumain isoform beta in zymogen state | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | SNN, NAG, SO4 | 20 (best 0.81) |
| Q39044 | AlphaFold monomer V2.0 prediction for vacuolar-processing enzyme beta-isozyme (Q39044) | predicted | A | — | 5 (best 0.66) |
Ligands
Experiment against prediction
- 6YSA chain A against the predicted model Q39044: TM-score 0.99, RMSD 0.95 Å
- 6YSA chain A against the predicted model Q39044: TM-score 0.99, RMSD 0.96 Å
- 6YSA chain B against the predicted model Q39044: TM-score 0.99, RMSD 0.97 Å
- 6YSA chain B against the predicted model Q39044: TM-score 0.99, RMSD 0.97 Å
- 6YSA chain E against the predicted model Q39044: TM-score 0.99, RMSD 0.98 Å
- 6YSA chain E against the predicted model Q39044: TM-score 0.99, RMSD 0.99 Å
- 6YSA chain G against the predicted model Q39044: TM-score 0.99, RMSD 1.01 Å
- 6YSA chain G against the predicted model Q39044: TM-score 0.99, RMSD 1.01 Å
- 6YSA chain D against the predicted model Q39044: TM-score 0.98, RMSD 1.27 Å
- 6YSA chain D against the predicted model Q39044: TM-score 0.98, RMSD 1.27 Å
Elsewhere
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