UniProt Q38859
DNA-directed RNA polymerases II, IV and V subunit 11 (Q38859)
DNA-directed RNA polymerases II, IV and V subunit 11 (UniProt Q38859): 7 experimental structures and 1 predicted model on GenesisL1, 6 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q38859
- Protein
- DNA-directed RNA polymerases II, IV and V subunit 11
- Experimental structures
- 7
- Predicted models
- 1
- Pockets
- 6 · 5 records with a druggable one
Structures
8 records of Q38859 in the MolNFT archive: 7 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7EU0 | The cryo-EM structure of A. thaliana Pol IV-RDR2 backtracked complex | electron microscopy | K | — | 2 (best 0.74) |
| 7EU0 | The cryo-EM structure of a. thaliana pol IV-RDR2 backtracked complex | electron microscopy | K | — | — |
| 7EU1 | The cryo-EM structure of a. thaliana pol IV-RDR2 holoenzyme | electron microscopy | K | — | — |
| 8HYJ | A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex | electron microscopy | K | — | 1 (best 0.76) |
| 8XMB | NTP-bound Pol IV transcription elongation complex | electron microscopy | K | — | 1 (best 0.79) |
| 8XMD | Pre-translocated Pol IV transcription elongation complex | electron microscopy | K | — | 1 (best 0.79) |
| 8XME | Backtracked Pol IV transcription elongation complex | electron microscopy | K | — | 1 (best 0.79) |
| Q38859 | AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerases II, IV and V subunit 11 (Q38859) | predicted | A | — | — |
Experiment against prediction
- 8XMD chain K against the predicted model Q38859: TM-score 0.98, RMSD 0.48 Å
- 8XME chain K against the predicted model Q38859: TM-score 0.98, RMSD 0.48 Å
- 7EU0 chain K against the predicted model Q38859: TM-score 0.98, RMSD 0.49 Å
- 7EU0 chain K against the predicted model Q38859: TM-score 0.98, RMSD 0.49 Å
- 8XMB chain K against the predicted model Q38859: TM-score 0.98, RMSD 0.50 Å
- 8HYJ chain K against the predicted model Q38859: TM-score 0.98, RMSD 0.62 Å
- 7EU1 chain K against the predicted model Q38859: TM-score 0.96, RMSD 0.79 Å
Elsewhere
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