UniProt Q2YDS1
Q2YDS1
Q2YDS1 (UniProt Q2YDS1): 18 experimental structures and 1 predicted model on GenesisL1. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q2YDS1
- Experimental structures
- 18
- Predicted models
- 1
Structures
19 records of Q2YDS1 in the MolNFT archive: 18 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3EI1 | Structure of hsDDB1-drDDB2 bound to a 14 bp 6-4 photoproduct containing DNA-duplex | x-ray diffraction | B | — | — |
| 3EI1 | Structure of HSDDB1-DRDDB2 bound to a 14 bp 6-4 photoproduct containing DNA-duplex | x-ray diffraction | B | — | — |
| 3EI2 | Structure of hsDDB1-drDDB2 bound to a 16 bp abasic site containing DNA-duplex | x-ray diffraction | B | — | — |
| 3EI2 | Structure of HSDDB1-DRDDB2 bound to a 16 bp abasic site containing DNA-duplex | x-ray diffraction | B | — | — |
| 3EI3 | Structure of the hsDDB1-drDDB2 complex | x-ray diffraction | B | — | — |
| 3EI3 | Structure of the HSDDB1-DRDDB2 complex | x-ray diffraction | B | — | — |
| 4A08 | Structure of hsDDB1-drDDB2 bound to a 13 bp CPD-duplex (purine at D-1 position) at 3.0 A resolution… | x-ray diffraction | B | — | — |
| 4A08 | Structure of HSDDB1-DRDDB2 bound to a 13 bp cpd-duplex (purine at D-1 position) at 3.0 a resolution… | x-ray diffraction | B | — | — |
| 4A09 | Structure of hsDDB1-drDDB2 bound to a 15 bp CPD-duplex (purine at D-1 position) at 3.1 A resolution… | x-ray diffraction | B | — | — |
| 4A09 | Structure of HSDDB1-DRDDB2 bound to a 15 bp cpd-duplex (purine at D-1 position) at 3.1 a resolution… | x-ray diffraction | B | — | — |
| 4A0A | Structure of hsDDB1-drDDB2 bound to a 16 bp CPD-duplex (pyrimidine at D-1 position) at 3.6 A… | x-ray diffraction | B | — | — |
| 4A0A | Structure of HSDDB1-DRDDB2 bound to a 16 bp cpd-duplex (pyrimidine at D-1 position) at 3.6 a… | x-ray diffraction | B | — | — |
| 4A0B | Structure of hsDDB1-drDDB2 bound to a 16 bp CPD-duplex (pyrimidine at D-1 position) at 3.8 A… | x-ray diffraction | B, D | — | — |
| 4A0B | Structure of HSDDB1-DRDDB2 bound to a 16 bp cpd-duplex (pyrimidine at D-1 position) at 3.8 a… | x-ray diffraction | B, D | — | — |
| 4A0K | Structure of DDB1-DDB2-CUL4A-RBX1 bound to a 12 bp abasic site containing DNA-duplex | x-ray diffraction | D | — | — |
| 4A0K | Structure of DDB1-DDB2-CUL4A-RBX1 bound to a 12 bp abasic site containing DNA-duplex | x-ray diffraction | D | — | — |
| 4A0L | Structure of DDB1-DDB2-CUL4B-RBX1 bound to a 12 bp abasic site containing DNA-duplex | x-ray diffraction | B, D | — | — |
| 4A0L | Structure of DDB1-DDB2-CUL4B-RBX1 bound to a 12 bp abasic site containing DNA-duplex | x-ray diffraction | B, D | — | — |
| Q2YDS1 | AlphaFold monomer V2.0 prediction for DNA damage-binding protein 2 (Q2YDS1) | predicted | A | — | — |
Experiment against prediction
- 4A08 chain B against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.70 Å
- 4A08 chain B against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.70 Å
- 3EI3 chain B against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.84 Å
- 3EI3 chain B against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.84 Å
- 4A0L chain B against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.97 Å
- 4A0L chain B against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.97 Å
- 3EI2 chain B against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.97 Å
- 3EI2 chain B against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.97 Å
- 4A0L chain D against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.97 Å
- 4A0L chain D against the predicted model Q2YDS1: TM-score 0.99, RMSD 0.97 Å
Elsewhere
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