UniProt Q13084
39S ribosomal protein L28, mitochondrial (Q13084)
39S ribosomal protein L28, mitochondrial (UniProt Q13084): 29 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 15 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q13084
- Protein
- 39S ribosomal protein L28, mitochondrial
- Experimental structures
- 29
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 15 · 7 records with a druggable one
Structures
30 records of Q13084 in the MolNFT archive: 29 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5OOL | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded… | electron microscopy | X | — | — |
| 5OOL | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded… | electron microscopy | X | — | — |
| 5OOM | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded… | electron microscopy | X | — | — |
| 5OOM | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded… | electron microscopy | X | — | — |
| 6I9R | Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin | electron microscopy | X | — | — |
| 6NU2 | Structural insights into unique features of the human mitochondrial ribosome recycling | electron microscopy | X | — | — |
| 6ZS9 | Human mitochondrial ribosome in complex with ribosome recycling factor | electron microscopy | XX | — | — |
| 6ZSB | Human mitochondrial ribosome in complex with mRNA and P-site tRNA | electron microscopy | XX | — | — |
| 6ZSC | Human mitochondrial ribosome in complex with E-site tRNA | electron microscopy | XX | — | 4 (best 0.85) |
| 7L20 | Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt. | electron microscopy | X | — | — |
| 7OF0 | Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with… | electron microscopy | X | — | 3 (best 0.85) |
| 7OF0 | Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with… | electron microscopy | X | — | — |
| 7OF4 | Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC… | electron microscopy | X | — | — |
| 7OF5 | Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with… | electron microscopy | X | — | 2 (best 0.85) |
| 7OI6 | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 1 | electron microscopy | X | — | — |
| 7OI7 | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2 | electron microscopy | X | — | — |
| 7OI8 | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A | electron microscopy | X | — | — |
| 7OI9 | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B | electron microscopy | X | — | — |
| 7OIA | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3C | electron microscopy | X | — | — |
| 7OIB | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D | electron microscopy | X | — | — |
| 7OIC | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4 | electron microscopy | X | — | 2 (best 0.84) |
| 7OIE | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B | electron microscopy | X | — | — |
| 7PD3 | Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and… | electron microscopy | X | — | — |
| 7QH6 | Cryo-EM structure of the human mtlsu assembly intermediate upon MRM2 depletion - class 1 | electron microscopy | X | — | — |
| 7QH7 | Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4 | electron microscopy | X | — | — |
| 7QH7 | Cryo-EM structure of the human mtlsu assembly intermediate upon MRM2 depletion - class 4 | electron microscopy | X | — | — |
| 8K2A | Cryo-EM structure of the human 55S mitoribosome with Tigecycline | electron microscopy | Lb | — | 1 (best 0.84) |
| 8OIR | 55S human mitochondrial ribosome with mtRF1 and P-site tRNA | electron microscopy | BE | MG | — |
| 8OIT | 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA | electron microscopy | BE | MG | 1 (best 0.84) |
| Q13084 | AlphaFold monomer V2.0 prediction for 39S ribosomal protein L28, mitochondrial (Q13084) | predicted | A | — | 2 (best 0.63) |
Ligands
- MG · Magnesium ion · in 2 records
Experiment against prediction
- 7OIA chain X against the predicted model Q13084: TM-score 0.99, RMSD 0.60 Å
- 7OI8 chain X against the predicted model Q13084: TM-score 0.99, RMSD 0.62 Å
- 7OIB chain X against the predicted model Q13084: TM-score 0.99, RMSD 0.64 Å
- 8OIR chain BE against the predicted model Q13084: TM-score 0.99, RMSD 0.64 Å
- 8OIT chain BE against the predicted model Q13084: TM-score 0.99, RMSD 0.64 Å
- 5OOM chain X against the predicted model Q13084: TM-score 0.99, RMSD 0.64 Å
- 5OOM chain X against the predicted model Q13084: TM-score 0.99, RMSD 0.64 Å
- 7OF4 chain X against the predicted model Q13084: TM-score 0.99, RMSD 0.65 Å
- 5OOL chain X against the predicted model Q13084: TM-score 0.99, RMSD 0.66 Å
- 5OOL chain X against the predicted model Q13084: TM-score 0.99, RMSD 0.66 Å
Elsewhere
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