UniProt Q10330
60S ribosomal protein L25-A (Q10330)
60S ribosomal protein L25-A (UniProt Q10330): 10 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 17 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q10330
- Protein
- 60S ribosomal protein L25-A
- Experimental structures
- 10
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 17 · 9 records with a druggable one
Structures
11 records of Q10330 in the MolNFT archive: 10 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 8ESQ | Ytm1 associated nascent 60S ribosome State 2 | electron microscopy | X | — | — |
| 8ESR | Ytm1 associated nascent 60S ribosome (-fkbp39) State 2 | electron microscopy | X | — | 2 (best 0.88) |
| 8ETC | Fkbp39 associated nascent 60S ribosome State 4 | electron microscopy | X | — | 2 (best 0.88) |
| 8ETG | Fkbp39 associated 60S nascent ribosome State 3 | electron microscopy | X | — | 2 (best 0.86) |
| 8ETI | Fkbp39 associated 60S nascent ribosome State 1 | electron microscopy | X | — | 3 (best 0.87) |
| 8EUG | Ytm1 associated nascent 60S ribosome State 3 | electron microscopy | X | — | 2 (best 0.89) |
| 8EUI | Ytm1 associated nascent 60S ribosome (-fkbp39) State 3 | electron microscopy | X | — | 3 (best 0.89) |
| 9AXT | Non-translating S. pombe ribosome | electron microscopy | Bj | — | 1 (best 0.87) |
| 9AXU | Non-translating S. pombe ribosome large subunit | electron microscopy | j | MG | 1 (best 0.87) |
| 9AXV | Translating S. pombe ribosome | electron microscopy | Bj | — | 1 (best 0.87) |
| Q10330 | AlphaFold monomer V2.0 prediction for 60S ribosomal protein L25-a (Q10330) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 1 record
Experiment against prediction
- 8EUG chain X against the predicted model Q10330: TM-score 0.96, RMSD 0.86 Å
- 8EUI chain X against the predicted model Q10330: TM-score 0.96, RMSD 0.86 Å
- 8ETC chain X against the predicted model Q10330: TM-score 0.96, RMSD 0.91 Å
- 9AXV chain Bj against the predicted model Q10330: TM-score 0.96, RMSD 0.91 Å
- 9AXU chain j against the predicted model Q10330: TM-score 0.95, RMSD 0.93 Å
- 9AXT chain Bj against the predicted model Q10330: TM-score 0.95, RMSD 0.94 Å
- 8ETG chain X against the predicted model Q10330: TM-score 0.88, RMSD 2.08 Å
- 8ESR chain X against the predicted model Q10330: TM-score 0.88, RMSD 2.29 Å
- 8ESQ chain X against the predicted model Q10330: TM-score 0.88, RMSD 2.23 Å
- 8ETI chain X against the predicted model Q10330: TM-score 0.84, RMSD 2.43 Å
Elsewhere
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